RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TBK1Q9UHD2 729 aa17.11■□□□□ 0.33
USP42-201ENST00000306177 TLK1Q9UKI8 766 aa17.11■□□□□ 0.33
USP42-201ENST00000306177 NFU1Q9UMS0 254 aa17.11■□□□□ 0.33
USP42-201ENST00000306177 NOVA2Q9UNW9 492 aaKnown RBP17.11■□□□□ 0.33
USP42-201ENST00000306177 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
USP42-201ENST00000306177 CHRNA5P30532 468 aa17.11■□□□□ 0.33
USP42-201ENST00000306177 RFX5P48382 616 aaPredicted RBP17.11■□□□□ 0.33
USP42-201ENST00000306177 ZWILCHQ9H900 591 aa17.11■□□□□ 0.33
USP42-201ENST00000306177 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
USP42-201ENST00000306177 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 RBM41Q96IZ5 413 aaKnown RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 NCAPGQ9BPX3 1015 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 FAM213AQ9BRX8 229 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 TOPORSQ9NS56 1045 aaPredicted RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 TECPR2O15040 1411 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 ARPP19P56211 112 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 PSMC5P62195 406 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 MCUQ8NE86 351 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 LXNQ9BS40 222 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 ZNF18P17022 549 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 NR1D1P20393 614 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 XPAP23025 273 aaPredicted RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 C6orf118Q5T5N4 469 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 ESYT2A0FGR8 921 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 STAT3P40763 770 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 VAMP7P51809 220 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 SATB1Q01826 763 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 ADCY2Q08462 1091 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 ZNF699Q32M78 642 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 PSPC1Q8WXF1 523 aaKnown RBP17.1■□□□□ 0.33
USP42-201ENST00000306177 GABBR1Q9UBS5 961 aa17.1■□□□□ 0.33
USP42-201ENST00000306177 RIMBP3CA6NJZ7 1639 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 RIMBP3BA6NNM3 1639 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 RIMBP3Q9UFD9 1639 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
USP42-201ENST00000306177 CDO1Q16878 200 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 FBXO38Q6PIJ6 1188 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 PYROXD1Q8WU10 500 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 EXOC4Q96A65 974 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 Q9H521 79 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 NGRNQ9NPE2 291 aaKnown RBP17.09■□□□□ 0.33
USP42-201ENST00000306177 HMGB1P1B2RPK0 211 aaPredicted RBP17.09■□□□□ 0.33
USP42-201ENST00000306177 ZNF394Q53GI3 561 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 EFCAB13Q8IY85 973 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
USP42-201ENST00000306177 HSPH1Q92598 858 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 CALB1P05937 261 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 GNAT1P11488 350 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 FLT1P17948 1338 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 STX1BP61266 288 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 CEP120Q8N960 986 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 MYL3P08590 195 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 KCNB1Q14721 858 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 SWSAP1Q6NVH7 229 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 PCGF5Q86SE9 256 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 IGDCC4Q8TDY8 1250 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 EIF2AK1Q9BQI3 630 aaKnown RBP17.09■□□□□ 0.33
USP42-201ENST00000306177 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 ACAD9Q9H845 621 aa17.09■□□□□ 0.33
USP42-201ENST00000306177 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
USP42-201ENST00000306177 DIP2BQ9P265 1576 aa17.08■□□□□ 0.33
USP42-201ENST00000306177 RCN2Q14257 317 aa17.08■□□□□ 0.33
USP42-201ENST00000306177 TMEM270Q6UE05 265 aa17.08■□□□□ 0.33
USP42-201ENST00000306177 ANGPTL3Q9Y5C1 460 aa17.08■□□□□ 0.33
USP42-201ENST00000306177 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP42-201ENST00000306177 SNCBQ16143 134 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 RYBPQ8N488 228 aaPredicted RBP17.08■□□□□ 0.32
USP42-201ENST00000306177 CFAP36Q96G28 342 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 STRIP2Q9ULQ0 834 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 A0A1W2PQC6 194 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 TBXAS1P24557 533 aaPredicted RBP17.08■□□□□ 0.32
USP42-201ENST00000306177 NFX1Q12986 1120 aaKnown RBP17.08■□□□□ 0.32
USP42-201ENST00000306177 PDIA5Q14554 519 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 TTC1Q99614 292 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 MAGED2Q9UNF1 606 aaPredicted RBP17.08■□□□□ 0.32
USP42-201ENST00000306177 IQGAP1P46940 1657 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 IQANK1A0A1B0GTG1 560 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 SERPINB6P35237 376 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 GPC3P51654 580 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 SESN3P58005 492 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 NKX1-1Q15270 411 aaPredicted RBP17.08■□□□□ 0.32
USP42-201ENST00000306177 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.32
USP42-201ENST00000306177 INTS2Q9H0H0 1204 aaKnown RBP17.08■□□□□ 0.32
USP42-201ENST00000306177 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 SPATA31A5Q5VU36 1347 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 SPATA31A7Q8IWB4 1347 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 DCLK2Q8N568 766 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.07■□□□□ 0.32
USP42-201ENST00000306177 POLD4Q9HCU8 107 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 BAG5Q9UL15 447 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 TEX33O43247 280 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms