RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 NUCKS1Q9H1E3 243 aaKnown RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 MACROD2A1Z1Q3 448 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 GTPBP10A4D1E9 387 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 SLC16A4O15374 487 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 KRT86O43790 486 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 AKR1B10O60218 316 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ATP1A1P05023 1023 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 SERPING1P05155 500 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 PEX3P56589 373 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ACTR2P61160 394 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 MOGSQ13724 837 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CBWD6Q4V339 395 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CBWD3Q5JTY5 395 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CBWD5Q5RIA9 395 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ABHD15Q6UXT9 468 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 HAUS6Q7Z4H7 955 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 RIOX2Q8IUF8 465 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CCDC60Q8IWA6 550 aaPredicted RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 SMAP1Q8IYB5 467 aaPredicted RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 FAM133AQ8N9E0 248 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CHST13Q8NET6 341 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TMEM174Q8WUU8 243 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 BSNDQ8WZ55 320 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 UBXN4Q92575 508 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CDCA5Q96FF9 252 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 MAF1Q9H063 256 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ST6GALNAC4Q9H4F1 302 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 JPH1Q9HDC5 661 aaPredicted RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 CGNQ9P2M7 1197 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 PFASO15067 1338 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CNMDO75829 334 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 STAM2O75886 525 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 IPO7O95373 1038 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 ZSCAN20P17040 1043 aaPredicted RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 JAM2P57087 298 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 DLG4P78352 724 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 SP4Q02446 784 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ARID5AQ03989 594 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 PPATQ06203 517 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 KIF5AQ12840 1032 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 RAPGEF1Q13905 1077 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 SLC9C1Q4G0N8 1177 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 GADL1Q6ZQY3 521 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TRAPPC11Q7Z392 1133 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 SYCP3Q8IZU3 236 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 RDH13Q8NBN7 331 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 DNERQ8NFT8 737 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 IWS1Q96ST2 819 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 CBWD1Q9BRT8 395 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 DEF6Q9H4E7 631 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 MLXIPQ9HAP2 919 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 PDLIM7Q9NR12 457 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ZNF446Q9NWS9 450 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 GCNT4Q9P109 453 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 SLC9A2Q9UBY0 812 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 PUF60Q9UHX1 559 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 CAPN6Q9Y6Q1 641 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 SOWAHBA6NEL2 793 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 PJA2O43164 708 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TRIM49P0CI25 452 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TRIM49CP0CI26 452 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 IREB2P48200 963 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 FMO5P49326 533 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TDRD12Q587J7 1177 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 FAM102BQ5T8I3 360 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 PAPD7Q5XG87 772 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 GBP6Q6ZN66 633 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 SRGAP1Q7Z6B7 1085 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ANKRD35Q8N283 1001 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TMEM161BQ8NDZ6 487 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 SECISBP2LQ93073 1101 aaKnown RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 L3MBTL3Q96JM7 780 aaPredicted RBP7.16□□□□□ -1.26
USP47-201ENST00000305481 DRC1Q96MC2 740 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 ARID3AQ99856 593 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 KIFC3Q9BVG8 833 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TIPINQ9BVW5 301 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 PCIF1Q9H4Z3 704 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TXNRD2Q9NNW7 524 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 TCEAL9Q9UHQ7 104 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 MYO6Q9UM54 1294 aa7.16□□□□□ -1.26
USP47-201ENST00000305481 A0A087X0T9 212 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 SPDYE5A6NIY4 337 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 EXOC3O60645 756 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 EIF3JO75822 258 aaKnown RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 FAM228BP0C875 321 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ATP4AP20648 1035 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ICAM3P32942 547 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 MAGEA1P43355 309 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 NPTX2P47972 431 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ALDH5A1P51649 535 aaPredicted RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 PTK2Q05397 1052 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 MYBPC2Q14324 1141 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 STXBP2Q15833 593 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 C1orf220Q5T0J3 134 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ERO1BQ86YB8 467 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 C12orf56Q8IXR9 622 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 ANKRD13CQ8N6S4 541 aa7.15□□□□□ -1.26
USP47-201ENST00000305481 PROCA1Q8NCQ7 364 aaPredicted RBP7.15□□□□□ -1.26
USP47-201ENST00000305481 GOLGA5Q8TBA6 731 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms