RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 VEZTQ9HBM0 779 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 TUFT1Q9NNX1 390 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.16
HIF3A-204ENST00000300862 DNAJC12Q9UKB3 198 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 ZNF233A6NK53 670 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 OPA1O60313 960 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 FMO5P49326 533 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 ERVK-9P63128 1117 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 PPP2R5CQ13362 524 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 ARHGAP44Q17R89 818 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 C10orf76Q5T2E6 689 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 CFAP58Q5T655 872 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 ALS2CLQ60I27 953 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 AGPAT3Q9NRZ7 376 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 SEPT11Q9NVA2 429 aaKnown RBP14.04□□□□□ -0.16
HIF3A-204ENST00000300862 ZBTB21Q9ULJ3 1066 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 TMX2Q9Y320 296 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 ATAD5Q96QE3 1844 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 BTNL10A8MVZ5 291 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 GOLGA8KD6RF30 607 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 F8VZ95 297 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 STAT1P42224 750 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 GNGT1P63211 74 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 TNNC1P63316 161 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 PPFIA1Q13136 1202 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 VPS36Q86VN1 386 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 IQCKQ8N0W5 287 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 KAT2BQ92831 832 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 LXNQ9BS40 222 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 CAPS2Q9BXY5 557 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 PCIF1Q9H4Z3 704 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 TMEM59LQ9UK28 342 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 STK24Q9Y6E0 443 aa14.04□□□□□ -0.16
HIF3A-204ENST00000300862 A0A087WUV0 522 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-204ENST00000300862 CCT5P48643 541 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 NNTQ13423 1086 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 NAA35Q5VZE5 725 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 STYK1Q6J9G0 422 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 HS2ST1Q7LGA3 356 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 PALB2Q86YC2 1186 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 OLIG1Q8TAK6 271 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 HOOK2Q96ED9 719 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 TMEM39BQ9GZU3 492 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 TAS2R14Q9NYV8 317 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 TMOD2Q9NZR1 351 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 NENFQ9UMX5 172 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 NOC2LQ9Y3T9 749 aaKnown RBP14.03□□□□□ -0.16
HIF3A-204ENST00000300862 GRIN2DO15399 1336 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
HIF3A-204ENST00000300862 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 SOX5P35711 763 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 PDCLQ13371 301 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 ADAT2Q7Z6V5 191 aaKnown RBP14.03□□□□□ -0.16
HIF3A-204ENST00000300862 SYCP3Q8IZU3 236 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 C7orf43Q8WVR3 580 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 AGBL1Q96MI9 1066 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 FRMD4BQ9Y2L6 1034 aa14.03□□□□□ -0.16
HIF3A-204ENST00000300862 IPO5O00410 1097 aaKnown RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 KRIT1O00522 736 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 SART1O43290 800 aaKnown RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 PPP1R12BO60237 982 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 EXOC3O60645 756 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 HIP1RO75146 1068 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 FERP16591 822 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 DLG4P78352 724 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 IFI16Q16666 785 aaKnown RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 LDHDQ86WU2 507 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 DAW1Q8N136 415 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 MICALL1Q8N3F8 863 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 SCFD2Q8WU76 684 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 NACC1Q96RE7 527 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 GPR88Q9GZN0 384 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 ZNF70Q9UC06 446 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 AMACRQ9UHK6 382 aa14.02□□□□□ -0.16
HIF3A-204ENST00000300862 HERC5Q9UII4 1024 aaKnown RBP14.02□□□□□ -0.16
HIF3A-204ENST00000300862 ARHGEF35A5YM69 484 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 TMEM150BA6NC51 233 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 PGRMC1O00264 195 aaKnown RBP14.02□□□□□ -0.17
HIF3A-204ENST00000300862 BUB1BO60566 1050 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-204ENST00000300862 ITGB5P18084 799 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 NT5DC3Q86UY8 548 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 SUGP1Q8IWZ8 645 aaKnown RBP14.02□□□□□ -0.17
HIF3A-204ENST00000300862 IL31RAQ8NI17 732 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 SLC35G2Q8TBE7 412 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 PBKQ96KB5 322 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 INTS2Q9H0H0 1204 aaKnown RBP14.02□□□□□ -0.17
HIF3A-204ENST00000300862 NEUROG2Q9H2A3 272 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.17
HIF3A-204ENST00000300862 FBXL5Q9UKA1 691 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 FRMPD4Q14CM0 1322 aa14.02□□□□□ -0.17
HIF3A-204ENST00000300862 GTPBP10A4D1E9 387 aaKnown RBP14.01□□□□□ -0.17
HIF3A-204ENST00000300862 SLC15A2Q16348 729 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 MMS22LQ6ZRQ5 1243 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms