RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
CLPX-201ENST00000300107 TRIM56Q9BRZ2 755 aaKnown RBP13.72□□□□□ -0.21
CLPX-201ENST00000300107 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 INO80B-WBP1J3KQ70 363 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 GNGT2O14610 69 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 CD58P19256 250 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 PLA2G4AP47712 749 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 SYDE2Q5VT97 1194 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 ERICH1Q86X53 443 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 XXYLT1Q8NBI6 393 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 INO80BQ9C086 356 aaPredicted RBP13.71□□□□□ -0.21
CLPX-201ENST00000300107 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
CLPX-201ENST00000300107 MYO5CQ9NQX4 1742 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 ESYT2A0FGR8 921 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 FTLP02792 175 aaPredicted RBP13.71□□□□□ -0.21
CLPX-201ENST00000300107 SRGNP10124 158 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 AP3B2Q13367 1082 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 PDCD2Q16342 344 aaPredicted RBP13.71□□□□□ -0.21
CLPX-201ENST00000300107 SYNE4Q8N205 404 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 PIGOQ8TEQ8 1089 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 DEPDC1BQ8WUY9 529 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 IL17RAQ96F46 866 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 TTC1Q99614 292 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 FAM96AQ9H5X1 160 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 ARL2BPQ9Y2Y0 163 aa13.71□□□□□ -0.21
CLPX-201ENST00000300107 WDR64B1ANS9 1081 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 GCLMP48507 274 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 TFDP1Q14186 410 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 DCAF15Q66K64 600 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 OR6B2Q6IFH4 312 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 GLYCTKQ8IVS8 523 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 ADSSL1Q8N142 457 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 ARHGAP18Q8N392 663 aa13.71□□□□□ -0.22
CLPX-201ENST00000300107 PSMD14O00487 310 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 GDF11O95390 407 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 AGTP01019 485 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 FCER1AP12319 257 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 KRT10P13645 584 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 H2AFXP16104 143 aaPredicted RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 IL1RL1Q01638 556 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 LRIG3Q6UXM1 1119 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 GADL1Q6ZQY3 521 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 SPATA21Q7Z572 469 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 ZNF564Q8TBZ8 553 aaPredicted RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 TTC7AQ9ULT0 858 aaPredicted RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 TSPOAP1O95153 1857 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 EIF4E1BA6NMX2 242 aaKnown RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 GSG1L2A8MUP6 293 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 BBOX1O75936 387 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 HSPA4LO95757 839 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 KRT14P02533 472 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 CPVLQ9H3G5 476 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 SLC38A10Q9HBR0 1119 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 FIS1Q9Y3D6 152 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 PFASO15067 1338 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 M0QZ92 97 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 CYP2D6P10635 497 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 STAT2P52630 851 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 AP2B1P63010 937 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 IFRD2Q12894 506 aaPredicted RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 SLC18A3Q16572 532 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 FSCBQ5H9T9 825 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 ENGASEQ8NFI3 743 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 TRIM9Q9C026 710 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 CCSER1Q9C0I3 900 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
CLPX-201ENST00000300107 SMYD3Q9H7B4 428 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 POLD4Q9HCU8 107 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 NDE1Q9NXR1 346 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 CFAP69A5D8W1 941 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 EPHB1P54762 984 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 PEX3P56589 373 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 FAF2Q96CS3 445 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 FUT8Q9BYC5 575 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 WNT8AQ9H1J5 351 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 AGPAT5Q9NUQ2 364 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 TRIM10Q9UDY6 481 aa13.7□□□□□ -0.22
CLPX-201ENST00000300107 GGPS1O95749 300 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 MMP10P09238 476 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 HSPA8P11142 646 aaKnown RBP13.69□□□□□ -0.22
CLPX-201ENST00000300107 EEF1DP29692 281 aaKnown RBP13.69□□□□□ -0.22
CLPX-201ENST00000300107 CASP2P42575 452 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 TFDP2Q14188 446 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 STAMBPL1Q96FJ0 436 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 MS4A14Q96JA4 679 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 KLC2Q9H0B6 622 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 ORC6Q9Y5N6 252 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
CLPX-201ENST00000300107 SPATA31A3Q5VYP0 1347 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms