RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ARHGEF26Q96DR7 871 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 TAS2R14Q9NYV8 317 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 GPR75-ASB3A0A0A6YYF3 556 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 MYO1EQ12965 1108 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 PTF1AQ7RTS3 328 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 LNX1Q8TBB1 728 aaPredicted RBP15.92■□□□□ 0.14
CCNF-201ENST00000293968 THOC1Q96FV9 657 aaKnown RBP15.92■□□□□ 0.14
CCNF-201ENST00000293968 PAGR1Q9BTK6 254 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 FAM129AQ9BZQ8 928 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 SEMA4AQ9H3S1 761 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 ROBO3Q96MS0 1386 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 SMARCA1P28370 1054 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 SOX5P35711 763 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 GRAPQ13588 217 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 FAM98CQ17RN3 349 aaKnown RBP15.92■□□□□ 0.14
CCNF-201ENST00000293968 KIAA1755Q5JYT7 1200 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 GRAPLQ8TC17 118 aaPredicted RBP15.92■□□□□ 0.14
CCNF-201ENST00000293968 SLC35C1Q96A29 364 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 RUSC1Q9BVN2 902 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 NSRP1Q9H0G5 558 aaKnown RBP15.92■□□□□ 0.14
CCNF-201ENST00000293968 RABGAP1Q9Y3P9 1069 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 IGSF9BQ9UPX0 1349 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 CES2O00748 559 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 ACSL3O95573 720 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 SLC8A1P32418 973 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 HS2ST1Q7LGA3 356 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 SLFN12Q8IYM2 578 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 C1orf131Q8NDD1 294 aaKnown RBP15.91■□□□□ 0.14
CCNF-201ENST00000293968 TYW1Q9NV66 732 aaKnown RBP15.91■□□□□ 0.14
CCNF-201ENST00000293968 SERPINB13Q9UIV8 391 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 SNED1Q8TER0 1413 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 SLC12A3P55017 1021 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 ARHGAP4P98171 946 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 BYSLQ13895 437 aaKnown RBP15.91■□□□□ 0.14
CCNF-201ENST00000293968 COG2Q14746 738 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 EMC10Q5UCC4 262 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 PAIP2Q9BPZ3 127 aaKnown RBP15.91■□□□□ 0.14
CCNF-201ENST00000293968 NOD2Q9HC29 1040 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 USP40Q9NVE5 1235 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 FRMD4BQ9Y2L6 1034 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 A0A1B0GUL6 1792 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 PDXKO00764 312 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 SPOPO43791 374 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 NEBLO76041 1014 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 KCNJ1P48048 391 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 NT5C2P49902 561 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 UBXN2AP68543 259 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 TBC1D10BQ4KMP7 808 aaPredicted RBP15.91■□□□□ 0.14
CCNF-201ENST00000293968 BANK1Q8NDB2 785 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 GDAP1Q8TB36 358 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 GGA2Q9UJY4 613 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 ITGB4P16144 1822 aa15.91■□□□□ 0.14
CCNF-201ENST00000293968 RASGRF2O14827 1237 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 EXOC3O60645 756 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 PSMC2P35998 433 aaKnown RBP15.9■□□□□ 0.14
CCNF-201ENST00000293968 VPS41P49754 854 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
CCNF-201ENST00000293968 SEL1L2Q5TEA6 688 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 SHANK3Q9BYB0 1731 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 RBM5P52756 815 aaKnown RBP eCLIP15.9■□□□□ 0.14
CCNF-201ENST00000293968 SNX1Q13596 522 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 KIF2BQ8N4N8 673 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 UBL4BQ8N7F7 174 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 TAOK3Q9H2K8 898 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 PABPC3Q9H361 631 aaKnown RBP15.9■□□□□ 0.14
CCNF-201ENST00000293968 MCM8Q9UJA3 840 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 L3MBTL1Q9Y468 752 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 ATMINO43313 823 aaPredicted RBP15.9■□□□□ 0.14
CCNF-201ENST00000293968 CACNB3P54284 484 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 ERMARDQ5T6L9 678 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 RSRC1Q96IZ7 334 aaKnown RBP15.9■□□□□ 0.14
CCNF-201ENST00000293968 MXD3Q9BW11 206 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 CDCA7Q9BWT1 371 aaPredicted RBP15.9■□□□□ 0.14
CCNF-201ENST00000293968 A0A1B0GUA9 196 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 TRIP13Q15645 432 aaPredicted RBP15.9■□□□□ 0.14
CCNF-201ENST00000293968 EP400NLQ6ZTU2 488 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 HES6Q96HZ4 224 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 PCIF1Q9H4Z3 704 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 PKD2L1Q9P0L9 805 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
CCNF-201ENST00000293968 EIF4E1BA6NMX2 242 aaKnown RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 BTNL10A8MVZ5 291 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 HLA-DOAP06340 250 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 MARCKSL1P49006 195 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 RHBDL3P58872 404 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 CALCOCO2Q13137 446 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 LONRF1Q17RB8 773 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 GPATCH4Q5T3I0 446 aaKnown RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 UBAP2Q5T6F2 1119 aaKnown RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 PALB2Q86YC2 1186 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 CCT6BQ92526 530 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 ALG3Q92685 438 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 RNF25Q96BH1 459 aaPredicted RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 HOOK2Q96ED9 719 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 NAP1L4Q99733 375 aaKnown RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 DAGLAQ9Y4D2 1042 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 PTENP60484 403 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 ELF3P78545 371 aaPredicted RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 ACCSLQ4AC99 568 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms