RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PPM1FP49593 454 aaPredicted RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 TUBB4BP68371 445 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 DR1Q01658 176 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 BFSP1Q12934 665 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 NAA25Q14CX7 972 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 IL17AQ16552 155 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 RUFY4Q6ZNE9 571 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 PODNQ7Z5L7 613 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 ARFGAP2Q8N6H7 521 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 C11orf70Q9BRQ4 267 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 PARP2Q9UGN5 583 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 PCSK1NQ9UHG2 260 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 TACC3Q9Y6A5 838 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 CSDE1O75534 798 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 TNNC2P02585 160 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 FGFR4P22455 802 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 GRB10Q13322 594 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 GEN1Q17RS7 908 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 NBPF9Q3BBW0 867 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 MIS18BP1Q6P0N0 1132 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 VSIG1Q86XK7 387 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 ZBTB8OSQ8IWT0 167 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 CDAN1Q8IWY9 1227 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 CCDC33Q8N5R6 958 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 CCDC110Q8TBZ0 833 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 STMN4Q9H169 189 aaPredicted RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 SEMA6BQ9H3T3 888 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 RBM12Q9NTZ6 932 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 CEP72Q9P209 647 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 STIM2Q9P246 746 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 HPSEQ9Y251 543 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 INPP5FQ9Y2H2 1132 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 KIF13AQ9H1H9 1805 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 TRIM66O15016 1216 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 KRT1P04264 644 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 GAP43P17677 238 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 VAMP7P51809 220 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 BASP1P80723 227 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 GUCY1A3Q02108 690 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 R3HDM1Q15032 1099 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 E2F4Q16254 413 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 TRIM68Q6AZZ1 485 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 NUP85Q9BW27 656 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 TRIM7Q9C029 511 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 IKZF4Q9H2S9 585 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 L2HGDHQ9H9P8 463 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 PIM2Q9P1W9 311 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 GOLGA4Q13439 2230 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 JCADQ9P266 1359 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 LRRD1A4D1F6 860 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 PI4K2BG5E9Z4 385 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 MYO1CO00159 1063 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 BAATQ14032 418 aaPredicted RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 XRN1Q8IZH2 1706 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 FAM149B1Q96BN6 582 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 CFAP36Q96G28 342 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 TSNARE1Q96NA8 513 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 SPZ1Q9BXG8 430 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 ZMYND12Q9H0C1 365 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 SMYD2Q9NRG4 433 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 NOC2LQ9Y3T9 749 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 TUBBP07437 444 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 YWHABP31946 246 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 PSMC4P43686 418 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 EPHB4P54760 987 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 PSMD2Q13200 908 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 KIF22Q14807 665 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 SBK1Q52WX2 424 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 B4GALNT4Q76KP1 1039 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 MICALL2Q8IY33 904 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 IL17RAQ96F46 866 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 RILPQ96NA2 401 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 FMO2Q99518 471 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 INTS2Q9H0H0 1204 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 INTUQ9ULD6 942 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 MRPL42Q9Y6G3 142 aaKnown RBP5.16□□□□□ -1.58
UBR1-201ENST00000290650 SALL1Q9NSC2 1324 aa5.16□□□□□ -1.58
UBR1-201ENST00000290650 CCDC160A6NGH7 325 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 GOLGA8KD6RF30 607 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 CLGNO14967 610 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 CTNND1O60716 968 aaKnown RBP5.15□□□□□ -1.58
UBR1-201ENST00000290650 GAS8O95995 478 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 PSMD6Q15008 389 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 SPATA4Q8NEY3 305 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 ATP6V0A1Q93050 837 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 HEXIM2Q96MH2 286 aaKnown RBP5.15□□□□□ -1.58
UBR1-201ENST00000290650 LACRTQ9GZZ8 138 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 RNF19AQ9NV58 838 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 TAF1P21675 1872 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 POLRMTO00411 1230 aaKnown RBP5.15□□□□□ -1.58
UBR1-201ENST00000290650 YWHAGP61981 247 aaKnown RBP eCLIP5.15□□□□□ -1.58
UBR1-201ENST00000290650 ITIH3Q06033 890 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 KCNK18Q7Z418 384 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 LRP10Q7Z4F1 713 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 MSANTD4Q8NCY6 345 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 POLR3FQ9H1D9 316 aaPredicted RBP5.15□□□□□ -1.58
UBR1-201ENST00000290650 LRRC4BQ9NT99 713 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 CNOT8Q9UFF9 292 aaKnown RBP5.15□□□□□ -1.58
UBR1-201ENST00000290650 CAPN6Q9Y6Q1 641 aa5.15□□□□□ -1.58
UBR1-201ENST00000290650 CASZ1Q86V15 1759 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms