RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 JRKLQ9Y4A0 524 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 PHIPQ8WWQ0 1821 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 ANO9A1A5B4 782 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 PPP1R12BO60237 982 aaPredicted RBP21.07■□□□□ 0.96
BRAF-201ENST00000288602 TBC1D8O95759 1140 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 PEX3P56589 373 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 CAGE1Q8TC20 777 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 COG1Q8WTW3 980 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 ARFGAP3Q9NP61 516 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 SLC16A4O15374 487 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 RGS20O76081 388 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 KLRC1P26715 233 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 FMO5P49326 533 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 SOX10P56693 466 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 IQCEQ6IPM2 695 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 CATSPERGQ6ZRH7 1159 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 CNKSR2Q8WXI2 1034 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 SMARCAL1Q9NZC9 954 aa21.07■□□□□ 0.96
BRAF-201ENST00000288602 WDR64B1ANS9 1081 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 CCND2P30279 289 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 PSMC5P62195 406 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 VSNL1P62760 191 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 DLG4P78352 724 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 KIAA0753Q2KHM9 967 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 FAM102BQ5T8I3 360 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 MSANTD4Q8NCY6 345 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 CBWD1Q9BRT8 395 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 KIFC3Q9BVG8 833 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 A1CFQ9NQ94 594 aaKnown RBP21.06■□□□□ 0.96
BRAF-201ENST00000288602 EHD2Q9NZN4 543 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 TMOD4Q9NZQ9 345 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 SNX12Q9UMY4 172 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 ADAMTS5Q9UNA0 930 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 DOCK5Q9H7D0 1870 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 UBE4BO95155 1302 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 LOXHD1Q8IVV2 1947 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 C19orf81C9J6K1 198 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 FDX1P10109 184 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 PLS3P13797 630 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 DNA2P51530 1060 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 NFIL3Q16649 462 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 ANO5Q75V66 913 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 NLRX1Q86UT6 975 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 C4orf19Q8IY42 314 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 ALS2CR12Q96Q35 445 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 SUGCTQ9HAC7 445 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 AFG3L2Q9Y4W6 797 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 KIAA1217Q5T5P2 1943 aa21.06■□□□□ 0.96
BRAF-201ENST00000288602 DDNO94850 711 aaPredicted RBP21.05■□□□□ 0.96
BRAF-201ENST00000288602 PLA2G4AP47712 749 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 GPC2Q8N158 579 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 SAMD3Q8N6K7 520 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 C12orf42Q96LP6 360 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 HINFPQ9BQA5 517 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 LRRN2O75325 713 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 USP2O75604 605 aaPredicted RBP21.05■□□□□ 0.96
BRAF-201ENST00000288602 GFPT2O94808 682 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 C2orf54Q08AI8 447 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 HAUS6Q7Z4H7 955 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 NOX5Q96PH1 765 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 MKNK1Q9BUB5 465 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 CYP39A1Q9NYL5 469 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 GABBR1Q9UBS5 961 aa21.05■□□□□ 0.96
BRAF-201ENST00000288602 SPDYE16A6NNV3 312 aaPredicted RBP21.04■□□□□ 0.96
BRAF-201ENST00000288602 LYPLA2O95372 231 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 JAK3P52333 1124 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 KRT76Q01546 638 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 LONRF2Q1L5Z9 754 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 CREG2Q8IUH2 290 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 NSUN6Q8TEA1 469 aaKnown RBP21.04■□□□□ 0.96
BRAF-201ENST00000288602 TEX13BQ9BXU2 312 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 CCDC151A5D8V7 595 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 JAM2P57087 298 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 MOV10L1Q9BXT6 1211 aaKnown RBP21.04■□□□□ 0.96
BRAF-201ENST00000288602 ABCB6Q9NP58 842 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 RAB21Q9UL25 225 aa21.04■□□□□ 0.96
BRAF-201ENST00000288602 ZNF862O60290 1169 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 PALMO75781 387 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 FSTL1Q12841 308 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 BFSP1Q12934 665 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 TREML2Q5T2D2 321 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.03■□□□□ 0.96
BRAF-201ENST00000288602 OSBPL9Q96SU4 736 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 PNMA2Q9UL42 364 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 PACSIN2Q9UNF0 486 aaPredicted RBP21.03■□□□□ 0.96
BRAF-201ENST00000288602 PCDHA10Q9Y5I2 948 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 GTPBP10A4D1E9 387 aaKnown RBP21.03■□□□□ 0.96
BRAF-201ENST00000288602 ZMYND10O75800 440 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 FTCDO95954 541 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 KCNA2P16389 499 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 VGLL4Q14135 290 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 NAB2Q15742 525 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 SWSAP1Q6NVH7 229 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 INPP4AQ96PE3 977 aaPredicted RBP21.03■□□□□ 0.96
BRAF-201ENST00000288602 TLR10Q9BXR5 811 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 FUT8Q9BYC5 575 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 ACAD9Q9H845 621 aa21.03■□□□□ 0.96
BRAF-201ENST00000288602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.03■□□□□ 0.961e-6■■■■■ 110.1
BRAF-201ENST00000288602 GOLGA8IPA6NC78 632 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 GOLGA8JA6NMD2 632 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms