RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 Q4G0T1 1027 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 ADGRD2Q7Z7M1 963 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 LOXHD1Q8IVV2 1947 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 FAM177A1Q8N128 213 aaPredicted RBP15.81■□□□□ 0.12
TPM1-202ENST00000288398 LRRC43Q8N309 656 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 ZNF274Q96GC6 653 aaPredicted RBP15.81■□□□□ 0.12
TPM1-202ENST00000288398 CDCA3Q99618 268 aaPredicted RBP15.81■□□□□ 0.12
TPM1-202ENST00000288398 GCOM2Q9BZD3 368 aaPredicted RBP15.81■□□□□ 0.12
TPM1-202ENST00000288398 UNC45AQ9H3U1 944 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 ENTPD7Q9NQZ7 604 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 DACT1Q9NYF0 836 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 MARCH6O60337 910 aa15.8■□□□□ 0.12
TPM1-202ENST00000288398 BMS1Q14692 1282 aaKnown RBP15.8■□□□□ 0.12
TPM1-202ENST00000288398 XKR3Q5GH77 459 aa15.8■□□□□ 0.12
TPM1-202ENST00000288398 KRT25Q7Z3Z0 450 aa15.8■□□□□ 0.12
TPM1-202ENST00000288398 ZNF668Q96K58 619 aaPredicted RBP15.8■□□□□ 0.12
TPM1-202ENST00000288398 ZNF558Q96NG5 402 aa15.8■□□□□ 0.12
TPM1-202ENST00000288398 JPH2Q9BR39 696 aaPredicted RBP15.8■□□□□ 0.12
TPM1-202ENST00000288398 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
TPM1-202ENST00000288398 C11orf16Q9NQ32 467 aa15.8■□□□□ 0.12
TPM1-202ENST00000288398 PDRG1Q9NUG6 133 aa15.8■□□□□ 0.12
TPM1-202ENST00000288398 MYO7AQ13402 2215 aa15.8■□□□□ 0.12
TPM1-202ENST00000288398 CCDC194A0A1B0GVG4 234 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 DDX11L8A8MPP1 907 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 ZNF862O60290 1169 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM1-202ENST00000288398 TDP2O95551 362 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 DARSP14868 501 aaKnown RBP15.79■□□□□ 0.12
TPM1-202ENST00000288398 SFPQP23246 707 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM1-202ENST00000288398 CA8P35219 290 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 GPC3P51654 580 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 FAM189BP81408 668 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 TOB2Q14106 344 aaPredicted RBP15.79■□□□□ 0.12
TPM1-202ENST00000288398 DSC3Q14574 896 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 UGCGQ16739 394 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 MRPL9Q9BYD2 267 aaKnown RBP15.79■□□□□ 0.12
TPM1-202ENST00000288398 TM6SF1Q9BZW5 370 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 INO80BQ9C086 356 aaPredicted RBP15.79■□□□□ 0.12
TPM1-202ENST00000288398 ADAMTS10Q9H324 1103 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 DDX25Q9UHL0 483 aaKnown RBP15.79■□□□□ 0.12
TPM1-202ENST00000288398 BARX2Q9UMQ3 279 aaPredicted RBP15.79■□□□□ 0.12
TPM1-202ENST00000288398 LZTS1Q9Y250 596 aa15.79■□□□□ 0.12
TPM1-202ENST00000288398 EVPLQ92817 2033 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 KIAA1671Q9BY89 1806 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 PER2O15055 1255 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 COASYQ13057 564 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 PLPP4Q5VZY2 271 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 MOXD1Q6UVY6 613 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 ECHDC2Q86YB7 292 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 DAGLBQ8NCG7 672 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 SMRP1Q8NCR6 262 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 MRPS27Q92552 414 aaKnown RBP15.78■□□□□ 0.12
TPM1-202ENST00000288398 MSLNLQ96KJ4 702 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 NAP1L4Q99733 375 aaKnown RBP15.78■□□□□ 0.12
TPM1-202ENST00000288398 TCF25Q9BQ70 676 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 LARP6Q9BRS8 491 aaKnown RBP15.78■□□□□ 0.12
TPM1-202ENST00000288398 PCDHGC5Q9Y5F6 944 aa15.78■□□□□ 0.12
TPM1-202ENST00000288398 CYP3A7-CYP3A51PA0A087WV96 503 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 PSMD10O75832 226 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 EYA4O95677 639 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 EOMESO95936 686 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 SKIP12755 728 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 CYP3A7P24462 503 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 LETM2Q2VYF4 491 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 KCNT2Q6UVM3 1135 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 TMC7Q7Z402 723 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 RNF135Q8IUD6 432 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 EXOC8Q8IYI6 725 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 LINC01465Q8N7H1 131 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 GJA10Q969M2 543 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 CWH43Q9H720 699 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 NGRNQ9NPE2 291 aaKnown RBP15.77■□□□□ 0.12
TPM1-202ENST00000288398 CHST12Q9NRB3 414 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 SPG21Q9NZD8 308 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 CLEC1BQ9P126 229 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 MUTYHQ9UIF7 546 aa15.77■□□□□ 0.12
TPM1-202ENST00000288398 USP15Q9Y4E8 981 aaPredicted RBP15.77■□□□□ 0.12
TPM1-202ENST00000288398 A0A0U1RQF3 1178 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 FGFR4P22455 802 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 ALDH7A1P49419 539 aaKnown RBP15.76■□□□□ 0.11
TPM1-202ENST00000288398 ERVFC1P60507 584 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 PSMC5P62195 406 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 PLCB3Q01970 1234 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 DUSP6Q16828 381 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 INF2Q27J81 1249 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 TWF2Q6IBS0 349 aaKnown RBP15.76■□□□□ 0.11
TPM1-202ENST00000288398 ZNF410Q86VK4 478 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 RHPN2Q8IUC4 686 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 HELQQ8TDG4 1101 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 SLC7A3Q8WY07 619 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 RSPH1Q8WYR4 309 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 WASF1Q92558 559 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 MFSD14AQ96MC6 490 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 CASD1Q96PB1 797 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 NIFKQ9BYG3 293 aaKnown RBP15.76■□□□□ 0.11
TPM1-202ENST00000288398 BRMS1Q9HCU9 246 aa15.76■□□□□ 0.11
TPM1-202ENST00000288398 SUCLA2Q9P2R7 463 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms