RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 LRIT3Q3SXY7 679 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 TMEM119Q4V9L6 283 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 PADI6Q6TGC4 694 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 MAEAQ7L5Y9 396 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 KRI1Q8N9T8 703 aaKnown RBP22.12■■□□□ 1.13
TIMP4-201ENST00000287814 SEPT8Q92599 483 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 CCDC43Q96MW1 224 aaKnown RBP22.12■■□□□ 1.13
TIMP4-201ENST00000287814 ATP6V0A4Q9HBG4 840 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 PADI3Q9ULW8 664 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 DNM3Q9UQ16 869 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 SQORQ9Y6N5 450 aa22.12■■□□□ 1.13
TIMP4-201ENST00000287814 ARHGEF35A5YM69 484 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 EYA4O95677 639 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 KARSQ15046 597 aaKnown RBP22.11■■□□□ 1.13
TIMP4-201ENST00000287814 GPRC5CQ9NQ84 441 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 A0A087WZ62 844 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 GRXCR1A8MXD5 290 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 PPP6R2O75170 966 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 CSDE1O75534 798 aaKnown RBP22.11■■□□□ 1.13
TIMP4-201ENST00000287814 WDR5P61964 334 aaKnown RBP22.11■■□□□ 1.13
TIMP4-201ENST00000287814 IKBKEQ14164 716 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 ATL3Q6DD88 541 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.11■■□□□ 1.13
TIMP4-201ENST00000287814 USP38Q8NB14 1042 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 NLRP7Q8WX94 980 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 PSPC1Q8WXF1 523 aaKnown RBP22.11■■□□□ 1.13
TIMP4-201ENST00000287814 SYMPKQ92797 1274 aaKnown RBP22.11■■□□□ 1.13
TIMP4-201ENST00000287814 FDXACB1Q9BRP7 624 aaPredicted RBP22.11■■□□□ 1.13
TIMP4-201ENST00000287814 CCSER1Q9C0I3 900 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 POLD4Q9HCU8 107 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 COL4A3BPQ9Y5P4 624 aa22.11■■□□□ 1.13
TIMP4-201ENST00000287814 ABHD14A-ACY1A0A1B0GW23 586 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 GAS2O43903 313 aaKnown RBP22.1■■□□□ 1.13
TIMP4-201ENST00000287814 BAIAP3O94812 1187 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 CYP11B2P19099 503 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 ARL2P36404 184 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 ANP32AP39687 249 aaKnown RBP22.1■■□□□ 1.13
TIMP4-201ENST00000287814 LAMTOR4Q0VGL1 99 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 FAM228AQ86W67 206 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 ASAP3Q8TDY4 903 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 TCP11Q8WWU5 503 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 NLRP4Q96MN2 994 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 NT5C3AQ9H0P0 336 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 TMX1Q9H3N1 280 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 ERVK-5Q9HDB9 667 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 SLC4A7Q9Y6M7 1214 aa22.1■■□□□ 1.13
TIMP4-201ENST00000287814 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.09■■□□□ 1.13
TIMP4-201ENST00000287814 RPS6KA5O75582 802 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 DARSP14868 501 aaKnown RBP22.09■■□□□ 1.13
TIMP4-201ENST00000287814 EIF4BP23588 611 aaKnown RBP22.09■■□□□ 1.13
TIMP4-201ENST00000287814 DEFB103AP81534 67 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 NFX1Q12986 1120 aaKnown RBP22.09■■□□□ 1.13
TIMP4-201ENST00000287814 TMCO2Q7Z6W1 182 aaPredicted RBP22.09■■□□□ 1.13
TIMP4-201ENST00000287814 RTN4RL1Q86UN2 441 aaPredicted RBP22.09■■□□□ 1.13
TIMP4-201ENST00000287814 CDK5RAP3Q96JB5 506 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 MTIF3Q9H2K0 278 aaKnown RBP22.09■■□□□ 1.13
TIMP4-201ENST00000287814 IFT122Q9HBG6 1241 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 RCOR1Q9UKL0 485 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 CFAP45Q9UL16 551 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 ST3GAL5Q9UNP4 418 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 LOXHD1Q8IVV2 1947 aa22.09■■□□□ 1.13
TIMP4-201ENST00000287814 SZT2Q5T011 3432 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 SRGAP2CP0DJJ0 459 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 PLCG1P19174 1290 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 FGFR4P22455 802 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 PAK2Q13177 524 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 AXDND1Q5T1B0 1012 aaPredicted RBP22.08■■□□□ 1.13
TIMP4-201ENST00000287814 ZNF710Q8N1W2 664 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 LINC01599Q8WXQ3 324 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 APBB2Q92870 758 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 CALML4Q96GE6 196 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 LRCH3Q96II8 777 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 SCLT1Q96NL6 688 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 RUSC1Q9BVN2 902 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 BLOC1S4Q9NUP1 217 aa22.08■■□□□ 1.13
TIMP4-201ENST00000287814 SLC26A4O43511 780 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 GLRA2P23416 452 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 NUCB2P80303 420 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 CDC42EP1Q00587 391 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 POLR3FQ9H1D9 316 aaPredicted RBP22.07■■□□□ 1.12
TIMP4-201ENST00000287814 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.07■■□□□ 1.12
TIMP4-201ENST00000287814 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.07■■□□□ 1.12
TIMP4-201ENST00000287814 PLA2G4BP0C869 781 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 SLC12A3P55017 1021 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 FAM102BQ5T8I3 360 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 RINT1Q6NUQ1 792 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 C1orf186Q6ZWK4 172 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 ZNF410Q86VK4 478 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 KCTD17Q8N5Z5 321 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 SYT2Q8N9I0 419 aaPredicted RBP22.07■■□□□ 1.12
TIMP4-201ENST00000287814 RNF149Q8NC42 400 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 MCPH1Q8NEM0 835 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 KCNG4Q8TDN1 519 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 GCOM2Q9BZD3 368 aaPredicted RBP22.07■■□□□ 1.12
TIMP4-201ENST00000287814 MINDY3Q9H8M7 445 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 PCDHA7Q9UN72 937 aa22.07■■□□□ 1.12
TIMP4-201ENST00000287814 A0A087X0B3 334 aa22.06■■□□□ 1.12
TIMP4-201ENST00000287814 ENPP3O14638 875 aa22.06■■□□□ 1.12
TIMP4-201ENST00000287814 ASAP2O43150 1006 aa22.06■■□□□ 1.12
TIMP4-201ENST00000287814 MGEA5O60502 916 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms