RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 DTX3LQ8TDB6 740 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 HIC2Q96JB3 615 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 MIS12Q9H081 205 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-201ENST00000269571 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-201ENST00000269571 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 CLRN2A0PK11 232 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 GOLGA8IPA6NC78 632 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 GOLGA8JA6NMD2 632 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 MAP2K7O14733 419 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 CA8P35219 290 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 RABL6Q3YEC7 729 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-201ENST00000269571 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 PIP4K2CQ8TBX8 421 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 LRRC37BQ96QE4 947 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
ERBB2-201ENST00000269571 NUF2Q9BZD4 464 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 CPDO75976 1380 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 NDC80O14777 642 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 GYG2O15488 501 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
ERBB2-201ENST00000269571 RNF8O76064 485 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 FSBPO95073 299 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 GDF11O95390 407 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 TDP2O95551 362 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 INHBAP08476 426 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 CNGA1P29973 690 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 SLC44A4Q53GD3 710 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 NXNQ6DKJ4 435 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 SCYL2Q6P3W7 929 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 DNAAF5Q86Y56 855 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 AMNQ9BXJ7 453 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 ALG13Q9NP73 1137 aaKnown RBP12.97□□□□□ -0.33
ERBB2-201ENST00000269571 LEMD3Q9Y2U8 911 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 SLC4A7Q9Y6M7 1214 aa12.97□□□□□ -0.33
ERBB2-201ENST00000269571 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 POTECB2RU33 542 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 MMP10P09238 476 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 POLR2MP0CAP2 368 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 PSMD7P51665 324 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 COASYQ13057 564 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 LRRC43Q8N309 656 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 TTC1Q99614 292 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 REREQ9P2R6 1566 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 GOLGA8SH3BPF8 625 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 GOLGA8MH3BSY2 632 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 SERPINB4P48594 390 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 CCNHP51946 323 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-201ENST00000269571 SFR1Q86XK3 245 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 C1orf54Q8WWF1 131 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 TMEM60Q9H2L4 133 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 SAYSD1Q9NPB0 183 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 C1orf112Q9NSG2 853 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 TTLL3Q9Y4R7 772 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 MROH2AA6NES4 1674 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-201ENST00000269571 SAT1P21673 171 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-201ENST00000269571 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-201ENST00000269571 MMGT1Q8N4V1 131 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
ERBB2-201ENST00000269571 TTC17Q96AE7 1141 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 SPZ1Q9BXG8 430 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 RAB21Q9UL25 225 aa12.96□□□□□ -0.33
ERBB2-201ENST00000269571 VWDEQ8N2E2 1590 aa12.96□□□□□ -0.34
ERBB2-201ENST00000269571 ABCD1P33897 745 aa12.96□□□□□ -0.34
ERBB2-201ENST00000269571 ABCB5Q2M3G0 1257 aa12.96□□□□□ -0.34
ERBB2-201ENST00000269571 GRAMD1BQ3KR37 738 aa12.96□□□□□ -0.34
ERBB2-201ENST00000269571 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.96□□□□□ -0.34
ERBB2-201ENST00000269571 DEPTORQ8TB45 409 aa12.96□□□□□ -0.34
ERBB2-201ENST00000269571 STAMBPL1Q96FJ0 436 aa12.96□□□□□ -0.34
ERBB2-201ENST00000269571 MAP3K14Q99558 947 aa12.96□□□□□ -0.34
ERBB2-201ENST00000269571 ABL1P00519 1130 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 PLS3P13797 630 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 HERVK_113P62684 666 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 KIF22Q14807 665 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 SNRNP27Q8WVK2 155 aaKnown RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 TMEM47Q9BQJ4 181 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 CHORDC1Q9UHD1 332 aaPredicted RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 NARFQ9UHQ1 456 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 MT-ND3P03897 115 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 ZNF18P17022 549 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 HSD17B3P37058 310 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 CTTNQ14247 550 aaKnown RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 LONRF1Q17RB8 773 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 EPM2AIP1Q7L775 607 aaPredicted RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 GUF1Q8N442 669 aaKnown RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 ITFG2Q969R8 447 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms