RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 DYNLL1P63167 89 aaKnown RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 ARID5AQ03989 594 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 ADCY1Q08828 1119 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 MPP2Q14168 576 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 Q4G0T1 1027 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 KHDC1Q4VXA5 237 aaKnown RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 SOGA3Q5TF21 947 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 CRACR2BQ8N4Y2 399 aaPredicted RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 SLC35B4Q969S0 331 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 PLA2G12BQ9BX93 195 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 DMAP1Q9NPF5 467 aaPredicted RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 PDLIM1O00151 329 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 UFL1O94874 794 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 ERFP50548 548 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 NEK3P51956 506 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 TNNC1P63316 161 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 CUL1Q13616 776 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 SLC29A2Q14542 456 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 MUM1Q2TAK8 710 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 CACNA2D4Q7Z3S7 1137 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 MYLK2Q9H1R3 596 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 KANSL2Q9H9L4 492 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 MAGEC2Q9UBF1 373 aaPredicted RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 PRKAG3Q9UGI9 489 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 NOC2LQ9Y3T9 749 aaKnown RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 A6NJR5 290 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 MCM7P33993 719 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 STK4Q13043 487 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 TNIP1Q15025 636 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 TDRD12Q587J7 1177 aaKnown RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 ZC3H18Q86VM9 953 aaKnown RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.48□□□□□ -0.89
VAPB-201ENST00000265619 SNRNP27Q8WVK2 155 aaKnown RBP9.48□□□□□ -0.89
VAPB-201ENST00000265619 APPBP2Q92624 585 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 CHMP2BQ9UQN3 213 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 NUMBLQ9Y6R0 609 aa9.48□□□□□ -0.89
VAPB-201ENST00000265619 NRAPQ86VF7 1730 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 A0A087X0T9 212 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 ABLIM1O14639 778 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 UNC5CO95185 931 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 GJB6O95452 261 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 UQCRFS1P1P0C7P4 283 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 FAM228BP0C875 321 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 DYNC1I2Q13409 638 aaKnown RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 NPY5RQ15761 445 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 PKN1Q16512 942 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 PRR5LQ6MZQ0 368 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 SDCCAG8Q86SQ7 713 aaPredicted RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 PTPRN2Q92932 1015 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 ERGIC2Q96RQ1 377 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 CARD9Q9H257 536 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 SEMA4AQ9H3S1 761 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 WFS1O76024 890 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 MMP10P09238 476 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 RPL13P26373 211 aaKnown RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 PRDX5P30044 214 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 GBP1P32455 592 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 CD151P48509 253 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 KCNMA1Q12791 1236 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 SGMS1Q86VZ5 419 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 DZIP1Q86YF9 867 aaKnown RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 LCORLQ8N3X6 602 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 METTL13Q8N6R0 699 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 ANKRD42Q8N9B4 389 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 SCG3Q8WXD2 468 aaKnown RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 GATA6Q92908 595 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 TRAPPC9Q96Q05 1148 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 KIAA1683Q9H0B3 1180 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 CNTNAP4Q9C0A0 1308 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 A0A1W2PQJ5 194 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 NVLO15381 856 aaKnown RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 CBX6O95503 412 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 T-ENOLP0DO92 83 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 GYS1P13807 737 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 ZNF24P17028 368 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 RTP1P59025 263 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 NAB2Q15742 525 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 IRGCQ6NXR0 463 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 CYP4X1Q8N118 509 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 RNF10Q8N5U6 811 aaKnown RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 GLG1Q92896 1179 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 PDGFDQ9GZP0 370 aaPredicted RBP9.47□□□□□ -0.89
VAPB-201ENST00000265619 GPR108Q9NPR9 543 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 CTNNAL1Q9UBT7 734 aa9.47□□□□□ -0.89
VAPB-201ENST00000265619 MAGEA13PA6NCF6 341 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 FLOT1O75955 427 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 TJP3O95049 919 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 BAG3O95817 575 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 FGFR4P22455 802 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.89
VAPB-201ENST00000265619 RTN1Q16799 776 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 ZNF772Q68DY9 489 aaPredicted RBP9.46□□□□□ -0.89
VAPB-201ENST00000265619 ZNF449Q6P9G9 518 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 APBB1IPQ7Z5R6 666 aaPredicted RBP9.46□□□□□ -0.89
VAPB-201ENST00000265619 VGLL2Q8N8G2 317 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 RBBP8NLQ8NC74 664 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms