RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SCFD2Q8WU76 684 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 JAKMIP2Q96AA8 810 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 IQCDQ96DY2 449 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 INPP4AQ96PE3 977 aaPredicted RBP10.18□□□□□ -0.78
SSR3-201ENST00000265044 ALS2CR12Q96Q35 445 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 CHP1Q99653 195 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 CTAGE9A4FU28 777 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 SUPT20HL2P0C7V6 817 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 CYP2B6P20813 491 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 KCNV1Q6PIU1 500 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 CCDC60Q8IWA6 550 aaPredicted RBP10.18□□□□□ -0.78
SSR3-201ENST00000265044 FAM133AQ8N9E0 248 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 RDM1Q8NG50 284 aa10.18□□□□□ -0.78
SSR3-201ENST00000265044 CCNE2O96020 404 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 KRT5P13647 590 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 TMOD1P28289 359 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 ADORA2AP29274 412 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 STAT1P42224 750 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 GCLCP48506 637 aaPredicted RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 GCLMP48507 274 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 MYL7Q01449 175 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 UGCGQ16739 394 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 EHBP1Q8NDI1 1231 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 L3MBTL3Q96JM7 780 aaPredicted RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 NUCKS1Q9H1E3 243 aaKnown RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 PORCNQ9H237 461 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 CYP26B1Q9NR63 512 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 LRRN2O75325 713 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 TACC1O75410 805 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 NDUFA10O95299 355 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 OSTNP61366 133 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 NCBP1Q09161 790 aaKnown RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 WDR44Q5JSH3 913 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 TRIM50Q86XT4 487 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 RHPN2Q8IUC4 686 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 FAM167AQ96KS9 214 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 BCAS3Q9H6U6 928 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 NHEJ1Q9H9Q4 299 aaPredicted RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 LRRC53A6NM62 1247 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 BTBD19C9JJ37 291 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 TNPO2O14787 897 aaKnown RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 EMC2Q15006 297 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 LRRC71Q8N4P6 559 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 GTF3C2Q8WUA4 911 aaPredicted RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 PSPC1Q8WXF1 523 aaKnown RBP10.17□□□□□ -0.78
SSR3-201ENST00000265044 TSC1Q92574 1164 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 MAP7D2Q96T17 732 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 TXNRD2Q9NNW7 524 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 OLFML3Q9NRN5 406 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 LTBP1Q14766 1721 aa10.17□□□□□ -0.78
SSR3-201ENST00000265044 SMCHD1A6NHR9 2005 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 OATP04181 439 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 TUBB4AP04350 444 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 UBA1P22314 1058 aaKnown RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 GUCY2CP25092 1073 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 EIF4A3P38919 411 aaKnown RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 MXI1P50539 228 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 FRMD5Q7Z6J6 570 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 IRF2BP1Q8IU81 584 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 CRYGNQ8WXF5 182 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 TAF4BQ92750 862 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 FAM213AQ9BRX8 229 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 WRAP73Q9P2S5 460 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 RBPJLQ9UBG7 517 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 RGPD3A6NKT7 1758 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 RGPD4Q7Z3J3 1758 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 AKAP3O75969 853 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 TNFAIP3P21580 790 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 FAM47CQ5HY64 1035 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 INTS8Q75QN2 995 aaKnown RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 FAM49AQ9H0Q0 323 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 IKZF4Q9H2S9 585 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 AGPAT3Q9NRZ7 376 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 ZNF215Q9UL58 517 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 CAPN11Q9UMQ6 739 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 FRMPD4Q14CM0 1322 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 A0A0U1RQG5 324 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 LRRC10BA6NIK2 292 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 EIF3DO15371 548 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSR3-201ENST00000265044 DYNC1LI2O43237 492 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 SLU7O95391 586 aaKnown RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 TGFB3P10600 412 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 ACTN1P12814 892 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 NPTX2P47972 431 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 METTL7BQ6UX53 244 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 RNF149Q8NC42 400 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 COPS5Q92905 334 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 CAPZA3Q96KX2 299 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 RNF216Q9NWF9 866 aaPredicted RBP10.16□□□□□ -0.78
SSR3-201ENST00000265044 ADAMTS1Q9UHI8 967 aa10.16□□□□□ -0.78
SSR3-201ENST00000265044 KRT19P08727 400 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 SLC9A1P19634 815 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 MAP2K1Q02750 393 aaPredicted RBP10.15□□□□□ -0.78
SSR3-201ENST00000265044 GJC2Q5T442 439 aaPredicted RBP10.15□□□□□ -0.78
SSR3-201ENST00000265044 ARMCX2Q7L311 632 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 PSMB7Q99436 277 aa10.15□□□□□ -0.78
SSR3-201ENST00000265044 AP5M1Q9H0R1 490 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms