RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 MYH15Q9Y2K3 1946 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 ATRNO75882 1429 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 BAZ2AQ9UIF9 1905 aaKnown RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 POTEB3A0JP26 581 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 POTECB2RU33 542 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 GSTA1P08263 222 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 CDK8P49336 464 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 BPIFB4P59827 614 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 USP46P62068 366 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 C12orf60Q5U649 245 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 POTEBQ6S5H4 581 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 DPP8Q6V1X1 898 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 TLR10Q9BXR5 811 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 MOV10L1Q9BXT6 1211 aaKnown RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 PKD2L1Q9P0L9 805 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 SAMD15Q9P1V8 674 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 CHMP2BQ9UQN3 213 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 PLAAQ9Y263 795 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 KCPQ6ZWJ8 1503 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 GFPT2O94808 682 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 FUT4P22083 530 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 GSTT1P30711 240 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 CTNNA1P35221 906 aaKnown RBP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 SERPINB4P48594 390 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 ADCY1Q08828 1119 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 KRT25Q7Z3Z0 450 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 MXD3Q9BW11 206 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 CELF4Q9BZC1 486 aaKnown RBP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 UFL1O94874 794 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 FAM26FQ5R3K3 315 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 SMC1BQ8NDV3 1235 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 RAPGEF5Q92565 580 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 UBAP1Q9NZ09 502 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 SIPA1L3O60292 1781 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 IGF2BP3O00425 579 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 GRB10Q13322 594 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 TMED1Q13445 227 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 KIF2BQ8N4N8 673 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 SNRNP27Q8WVK2 155 aaKnown RBP15.29■□□□□ 0.04
SCARF1-201ENST00000263071 ANKRD27Q96NW4 1050 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 SELENOSQ9BQE4 189 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 PCDHA12Q9UN75 941 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 PLAGL2Q9UPG8 496 aa15.29■□□□□ 0.04
SCARF1-201ENST00000263071 UTRNP46939 3433 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 SLC9A1P19634 815 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 UBXN2AP68543 259 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 DPY19L2Q6NUT2 758 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCARF1-201ENST00000263071 UTP6Q9NYH9 597 aaKnown RBP15.28■□□□□ 0.04
SCARF1-201ENST00000263071 AMACRQ9UHK6 382 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 TMEM98Q9Y2Y6 226 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 RAD51CO43502 376 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 SLCO1A2P46721 670 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 ADCY7P51828 1080 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 RAD23BP54727 409 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-201ENST00000263071 RPS6KA1Q15418 735 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 P3H1Q32P28 736 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 CCDC25Q86WR0 208 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 SLF2Q8IX21 1173 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 IFT74Q96LB3 600 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 CORO1BQ9BR76 489 aa15.28■□□□□ 0.04
SCARF1-201ENST00000263071 RTCBQ9Y3I0 505 aaKnown RBP15.28■□□□□ 0.04
SCARF1-201ENST00000263071 COL1A1P02452 1464 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-201ENST00000263071 POTEFA5A3E0 1075 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 A8MUI8 341 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 ORC4O43929 436 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 INHBCP55103 352 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 ASIC2Q16515 512 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 CDC37Q16543 378 aaPredicted RBP15.27■□□□□ 0.04
SCARF1-201ENST00000263071 ECM1Q16610 540 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 MUM1Q2TAK8 710 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 POTEGQ6S5H5 508 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 POTEEQ6S8J3 1075 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 U2AF1L4Q8WU68 220 aaKnown RBP15.27■□□□□ 0.04
SCARF1-201ENST00000263071 HIC2Q96JB3 615 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 CCSER1Q9C0I3 900 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 HNRNPRO43390 633 aaKnown RBP15.27■□□□□ 0.04
SCARF1-201ENST00000263071 KRT13P13646 458 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 RASA1P20936 1047 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 PSMC4P43686 418 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 GRM4Q14833 912 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 SGSM1Q2NKQ1 1148 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 KLHDC7AQ5VTJ3 777 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 IQCKQ8N0W5 287 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 FNBP4Q8N3X1 1017 aaPredicted RBP15.27■□□□□ 0.04
SCARF1-201ENST00000263071 MDM1Q8TC05 714 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 TEKT1Q969V4 418 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 MTA3Q9BTC8 594 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms