RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 MSANTD4Q8NCY6 345 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 RPGRIP1Q96KN7 1286 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 DRC1Q96MC2 740 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 TEX13BQ9BXU2 312 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ARFGAP3Q9NP61 516 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ZNF214Q9UL59 606 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 FHOD1Q9Y613 1164 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 CAPN6Q9Y6Q1 641 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 WDR90Q96KV7 1748 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ATP8B1O43520 1251 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 LMNB1P20700 586 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 PLS1Q14651 629 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 TMEM132BQ14DG7 1078 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 UGCGQ16739 394 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ZNF746Q6NUN9 644 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 CC2D1AQ6P1N0 951 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 NOX5Q96PH1 765 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ACCSQ96QU6 501 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ANKZF1Q9H8Y5 726 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 SIX2Q9NPC8 291 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ANKEF1Q9NU02 776 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 HOXC10Q9NYD6 342 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 FAM53CQ9NYF3 392 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 SSC5DA1L4H1 1573 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 CCDC151A5D8V7 595 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 EXOC3O60645 756 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 SRGAP2O75044 1071 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 CCNE2O96020 404 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 TUBBP07437 444 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 FMO5P49326 533 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 ENOX2Q16206 610 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 C10orf76Q5T2E6 689 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 IRF2BP2Q7Z5L9 587 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 CAGE1Q8TC20 777 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 SENP7Q9BQF6 1050 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 MOV10L1Q9BXT6 1211 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 MAF1Q9H063 256 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 ACAD9Q9H845 621 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 AFG3L2Q9Y4W6 797 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 MYPNQ86TC9 1320 aa14.13□□□□□ -0.15
SPTLC1-201ENST00000262554 A0A087X0T9 212 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 BACH1O14867 736 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 RHOXF2BP0C7M4 288 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 FAM228BP0C875 321 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 PNMA6AP0CW24 399 aaPredicted RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 PRLRP16471 622 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 ANXA13P27216 316 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 HIRAP54198 1017 aaPredicted RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 NAP1L1P55209 391 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 XKR9Q5GH70 373 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 UTP14CQ5TAP6 766 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 IQCEQ6IPM2 695 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 SLC17A8Q8NDX2 589 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 CAPZA3Q96KX2 299 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 INPP4AQ96PE3 977 aaPredicted RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 IWS1Q96ST2 819 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 RHOXF2Q9BQY4 288 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 ADAMTS1Q9UHI8 967 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 RAB21Q9UL25 225 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 SNX12Q9UMY4 172 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 PCDHA10Q9Y5I2 948 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 DKC1O60832 514 aaKnown RBP eCLIP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 ERLIN1O75477 346 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 STAM2O75886 525 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 SEC31AO94979 1220 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 KRT13P13646 458 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 PRKCIP41743 596 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 JAM2P57087 298 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 SNRPFP62306 86 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 PTK2Q05397 1052 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 VPS36Q86VN1 386 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 SMAP1Q8IYB5 467 aaPredicted RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 ANKRD13CQ8N6S4 541 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 TMEM174Q8WUU8 243 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 MMS19Q96T76 1030 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 ST6GALNAC4Q9H4F1 302 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 CYP39A1Q9NYL5 469 aa14.12□□□□□ -0.15
SPTLC1-201ENST00000262554 SBF1O95248 1867 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 LOC285556D6RIA3 1793 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 FERP16591 822 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 GTF2BQ00403 316 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 BFSP1Q12934 665 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 PRKG1Q13976 671 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 NAB2Q15742 525 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 OTUD6AQ7L8S5 288 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 HAUS6Q7Z4H7 955 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 NOA1Q8NC60 698 aaKnown RBP14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 HNRNPLLQ8WVV9 542 aaKnown RBP14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 A1CFQ9NQ94 594 aaKnown RBP14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 SALL4Q9UJQ4 1053 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 DAAM1Q9Y4D1 1078 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 ARID2Q68CP9 1835 aa14.11□□□□□ -0.15
SPTLC1-201ENST00000262554 TMEM150BA6NC51 233 aa14.1□□□□□ -0.15
SPTLC1-201ENST00000262554 SPDYE16A6NNV3 312 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms