RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ELAC1Q9H777 363 aaKnown RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 DDX25Q9UHL0 483 aaKnown RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 NID2Q14112 1375 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 ZBTB42B2RXF5 422 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 ADAMTS3O15072 1205 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 REV3LO60673 3130 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 DKC1O60832 514 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAF4-202ENST00000262396 TBX10O75333 385 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 SFPQP23246 707 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAF4-202ENST00000262396 LTBRP36941 435 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 TTC3P53804 2025 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 NTRK3Q16288 839 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 LETM2Q2VYF4 491 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 XKR3Q5GH77 459 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 GALNT17Q6IS24 598 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 KRT25Q7Z3Z0 450 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 ADGRD2Q7Z7M1 963 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 ZBTB33Q86T24 672 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 SLC5A5Q92911 643 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 CDCA3Q99618 268 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-202ENST00000262396 TCF25Q9BQ70 676 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 AGXT2Q9BYV1 514 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 ZSWIM6Q9HCJ5 1215 aa13.77□□□□□ -0.21
TRAF4-202ENST00000262396 BARX2Q9UMQ3 279 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-202ENST00000262396 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 EPB41L2O43491 1005 aaKnown RBP13.76□□□□□ -0.21
TRAF4-202ENST00000262396 TDP2O95551 362 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 DARSP14868 501 aaKnown RBP13.76□□□□□ -0.21
TRAF4-202ENST00000262396 FGFR4P22455 802 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 GPC3P51654 580 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 COL19A1Q14993 1142 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 Q4G0T1 1027 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 TWF2Q6IBS0 349 aaKnown RBP13.76□□□□□ -0.21
TRAF4-202ENST00000262396 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 ECHDC2Q86YB7 292 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 MRPS27Q92552 414 aaKnown RBP13.76□□□□□ -0.21
TRAF4-202ENST00000262396 GJA10Q969M2 543 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 RPGRIP1Q96KN7 1286 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 MRPL9Q9BYD2 267 aaKnown RBP13.76□□□□□ -0.21
TRAF4-202ENST00000262396 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 PCDHGC5Q9Y5F6 944 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
TRAF4-202ENST00000262396 ZNF862O60290 1169 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 BAG4O95429 457 aaKnown RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 SKIP12755 728 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 TECP42680 631 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 ALDH7A1P49419 539 aaKnown RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 CAMK1Q14012 370 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 UGCGQ16739 394 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 INF2Q27J81 1249 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 KCNT2Q6UVM3 1135 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 CATSPER4Q7RTX7 472 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 RHPN2Q8IUC4 686 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 CRIPAKQ8N1N5 446 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 WASF1Q92558 559 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 LENG9Q96B70 501 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 MFSD14AQ96MC6 490 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 NLRP4Q96MN2 994 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 CCDC43Q96MW1 224 aaKnown RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 NAP1L4Q99733 375 aaKnown RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 ADAMTS10Q9H324 1103 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 NGRNQ9NPE2 291 aaKnown RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 SPG21Q9NZD8 308 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
TRAF4-202ENST00000262396 PIN4Q9Y237 131 aaKnown RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 ARIH1Q9Y4X5 557 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-202ENST00000262396 CCNT1O60563 726 aaKnown RBP13.74□□□□□ -0.21
TRAF4-202ENST00000262396 CSDE1O75534 798 aaKnown RBP13.74□□□□□ -0.21
TRAF4-202ENST00000262396 EOMESO95936 686 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-202ENST00000262396 EVCP57679 992 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 ERVFC1P60507 584 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 PSMC5P62195 406 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 FAM189BP81408 668 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 DSC3Q14574 896 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 RNF135Q8IUD6 432 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 EXOC8Q8IYI6 725 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 FAM177A1Q8N128 213 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-202ENST00000262396 SLC7A3Q8WY07 619 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 TMEM169Q96HH4 297 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 SH2D3AQ9BRG2 576 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 TM6SF1Q9BZW5 370 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 C11orf16Q9NQ32 467 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 KCNJ14Q9UNX9 436 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 LZTS1Q9Y250 596 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 INPP5FQ9Y2H2 1132 aa13.74□□□□□ -0.21
TRAF4-202ENST00000262396 USP15Q9Y4E8 981 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-202ENST00000262396 A0A087WZ62 844 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 PSMD10O75832 226 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 PBX3P40426 434 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 COASYQ13057 564 aa13.73□□□□□ -0.21
TRAF4-202ENST00000262396 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
TRAF4-202ENST00000262396 ANKRD1Q15327 319 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms