RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PADI6Q6TGC4 694 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 C16orf59Q7L2K0 433 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 ZNF410Q86VK4 478 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 ZNF579Q8NAF0 562 aaKnown RBP20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 GCOM2Q9BZD3 368 aaPredicted RBP20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 SCAND2PQ9GZW5 306 aaPredicted RBP20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 CIZ1Q9ULV3 898 aaPredicted RBP20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 ZDHHC9Q9Y397 364 aa20.84■□□□□ 0.93
CYSTM1-201ENST00000261811 GPR182O15218 404 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 RPS6KA5O75582 802 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 SLC34A2O95436 690 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 ME1P48163 572 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 GPC3P51654 580 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 MBTPS1Q14703 1052 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 ECM1Q16610 540 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 FTHL17Q9BXU8 183 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 BMP2KQ9NSY1 1161 aaPredicted RBP20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 COL4A3BPQ9Y5P4 624 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 SLC4A7Q9Y6M7 1214 aa20.83■□□□□ 0.93
CYSTM1-201ENST00000261811 A0A087WWV3 80 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 E9PMD0 336 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 GPR32O75388 356 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 LPIN1Q14693 890 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 C9orf50Q5SZB4 431 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 DBF4BQ8NFT6 615 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 TMEM143Q96AN5 459 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 SPATA32Q96LK8 384 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 CLIC6Q96NY7 704 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 PPP1R16BQ96T49 567 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 OSMRQ99650 979 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 KCND2Q9NZV8 630 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 GBF1Q92538 1859 aa20.82■□□□□ 0.92
CYSTM1-201ENST00000261811 SSBP05455 408 aaKnown RBP eCLIP20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 CYP11B2P19099 503 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 EIF4BP23588 611 aaKnown RBP20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 GRIN1Q05586 938 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 GRB10Q13322 594 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 MKRN4PQ13434 485 aaPredicted RBP20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 GPNMBQ14956 572 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 TMEM119Q4V9L6 283 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 CCDC73Q6ZRK6 1079 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 PRPF31Q8WWY3 499 aaKnown RBP20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 SYMPKQ92797 1274 aaKnown RBP20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 NLRP4Q96MN2 994 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 PLIN2Q99541 437 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 TIPINQ9BVW5 301 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 RNF216Q9NWF9 866 aaPredicted RBP20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 RCOR1Q9UKL0 485 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 TRIOBPQ9H2D6 2365 aa20.81■□□□□ 0.92
CYSTM1-201ENST00000261811 LAMTOR4Q0VGL1 99 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 NFX1Q12986 1120 aaKnown RBP20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 DRP2Q13474 957 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 KARSQ15046 597 aaKnown RBP20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 PPP2R5AQ15172 486 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 SPECC1Q5M775 1068 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 FAM102BQ5T8I3 360 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 RRAGBQ5VZM2 374 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 KIFAP3Q92845 792 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 EPSTI1Q96J88 318 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 PNMA5Q96PV4 448 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 SLC9A7Q96T83 725 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 ADAMTS10Q9H324 1103 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 FAM13BQ9NYF5 915 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 STK17AQ9UEE5 414 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 KCNG1Q9UIX4 513 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 PADI3Q9ULW8 664 aa20.8■□□□□ 0.92
CYSTM1-201ENST00000261811 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 AMHP03971 560 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 PLA2G4BP0C869 781 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 SRGAP2CP0DJJ0 459 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 SFPQP23246 707 aaKnown RBP eCLIP20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 CD52P31358 61 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 DDIT3P35638 169 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 PHKA2P46019 1235 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 LRIT3Q3SXY7 679 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 MAEAQ7L5Y9 396 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 SYT2Q8N9I0 419 aaPredicted RBP20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 PHOSPHO2Q8TCD6 241 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 IFT74Q96LB3 600 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 DRC1Q96MC2 740 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 POLR3FQ9H1D9 316 aaPredicted RBP20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 XPNPEP1Q9NQW7 623 aa20.79■□□□□ 0.92
CYSTM1-201ENST00000261811 A0A087WZ62 844 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 DARSP14868 501 aaKnown RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 PLCG1P19174 1290 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 ARL2P36404 184 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 POU5F1BQ06416 359 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 NCBP1Q09161 790 aaKnown RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 PCBP1Q15365 356 aaKnown RBP eCLIP20.78■□□□□ 0.924e-8■■■■□ 25.8
CYSTM1-201ENST00000261811 RASIP1Q5U651 963 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 SRGAP1Q7Z6B7 1085 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 RNF149Q8NC42 400 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 FDXACB1Q9BRP7 624 aaPredicted RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 PYM1Q9BRP8 204 aaKnown RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 CDHR5Q9HBB8 845 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 NOC2LQ9Y3T9 749 aaKnown RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 PTPRSQ13332 1948 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 ZSCAN20P17040 1043 aaPredicted RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 HABP4Q5JVS0 413 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms