RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ITIH4Q14624 930 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 CCDC105Q8IYK2 499 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 EPSTI1Q96J88 318 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 PTPN22Q9Y2R2 807 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 A0A0G2JND7 137 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 GPR162Q16538 588 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 DCAF17Q5H9S7 520 aaPredicted RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 ASIC3Q9UHC3 531 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 ZFP69BQ9UJL9 534 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 BOLA2-SMG1P6H3BVE0 249 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 DDX39AO00148 427 aaKnown RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 PGM3O95394 542 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 IL9RQ01113 521 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 AMPD2Q01433 879 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 MB21D1Q8N884 522 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 CAVIN3Q969G5 261 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 XPOTO43592 962 aaKnown RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 PDE1BQ01064 536 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 ATP1A4Q13733 1029 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 UAP1Q16222 522 aaPredicted RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 IZUMO2Q6UXV1 221 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 SRRM1Q8IYB3 904 aaKnown RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 REXO1Q8N1G1 1221 aaKnown RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 MTA3Q9BTC8 594 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 EIF2AQ9BY44 585 aaKnown RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 DCLRE1BQ9H816 532 aa13.91□□□□□ -0.18
TMEM260-201ENST00000261556 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
TMEM260-201ENST00000261556 TNKSO95271 1327 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 POTEFA5A3E0 1075 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 PPP6R2O75170 966 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 GMNNO75496 209 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 RXRBP28702 533 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 KLHL30Q0D2K2 578 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 BYSLQ13895 437 aaKnown RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 SEPT12Q8IYM1 358 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 PNMA1Q8ND90 353 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 SNX29Q8TEQ0 813 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 ZNF274Q96GC6 653 aaPredicted RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 THEGQ9P2T0 379 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 ATP7BP35670 1465 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 CDC42BPAQ5VT25 1732 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 TRIM64CA6NLI5 447 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 KRT10P13645 584 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 RPL13P26373 211 aaKnown RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 MARK3P27448 753 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 ADCY7P51828 1080 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 ZNF844Q08AG5 666 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 CYTH1Q15438 398 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 LACTB2Q53H82 288 aaPredicted RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 C6orf118Q5T5N4 469 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 CROCCP2Q86T23 111 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 FAM192AQ9GZU8 254 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 SPTLC1O15269 473 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 GFPT1Q06210 699 aaPredicted RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 MMEL1Q495T6 779 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 AGBL2Q5U5Z8 902 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 L3MBTL3Q96JM7 780 aaPredicted RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 NAP1L4Q99733 375 aaKnown RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 GLT8D2Q9H1C3 349 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
TMEM260-201ENST00000261556 GDAQ9Y2T3 454 aa13.9□□□□□ -0.18
TMEM260-201ENST00000261556 ARHGAP10A1A4S6 786 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 TCP10L2B9ZVM9 353 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.19
TMEM260-201ENST00000261556 BRAFP15056 766 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 SERPINB8P50452 374 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 NEK2P51955 445 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 PPIDQ08752 370 aaKnown RBP13.9□□□□□ -0.19
TMEM260-201ENST00000261556 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.19
TMEM260-201ENST00000261556 THOC5Q13769 683 aaKnown RBP13.9□□□□□ -0.19
TMEM260-201ENST00000261556 LRIG3Q6UXM1 1119 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 RGS9BPQ6ZS82 235 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 MTUS1Q9ULD2 1270 aa13.9□□□□□ -0.19
TMEM260-201ENST00000261556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 IQCA1LA6NCM1 817 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 DCDC2CA8MYV0 355 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 SPAG7O75391 227 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 ATP5HO75947 161 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 HAUS5O94927 633 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 HERVK_113P62684 666 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 TMEM53Q6P2H8 277 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 KRT25Q7Z3Z0 450 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 PATL1Q86TB9 770 aaKnown RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 FOXP4Q8IVH2 680 aaPredicted RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 CNOT8Q9UFF9 292 aaKnown RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 A6NJR5 290 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 SART1O43290 800 aaKnown RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 GOLGA8HP0CJ92 632 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 GJC1P36383 396 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 BTDP43251 543 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms