RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SPDYAQ5MJ70 313 aa7.05□□□□□ -1.28
TRA2B-201ENST00000259043 UBE2R2Q712K3 238 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-201ENST00000259043 IFNL2Q8IZJ0 200 aa7.05□□□□□ -1.28
TRA2B-201ENST00000259043 ERCC4Q92889 916 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-201ENST00000259043 NEIL1Q96FI4 390 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-201ENST00000259043 KIAA1683Q9H0B3 1180 aa7.05□□□□□ -1.28
TRA2B-201ENST00000259043 CABP5Q9NP86 173 aa7.05□□□□□ -1.28
TRA2B-201ENST00000259043 ACSS2Q9NR19 701 aa7.05□□□□□ -1.28
TRA2B-201ENST00000259043 Q9UFV3 132 aa7.05□□□□□ -1.28
TRA2B-201ENST00000259043 PTX3P26022 381 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-201ENST00000259043 APEX1P27695 318 aaKnown RBP7.04□□□□□ -1.28
TRA2B-201ENST00000259043 NOLC1Q14978 699 aaKnown RBP eCLIP7.04□□□□□ -1.28
TRA2B-201ENST00000259043 ZMAT1Q5H9K5 638 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 GRAMD4Q6IC98 578 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 KIAA0907Q7Z7F0 614 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-201ENST00000259043 LRRTM3Q86VH5 581 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 KIAA1958Q8N8K9 716 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 CALML6Q8TD86 181 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 CFHR4Q92496 578 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 GNRHR2Q96P88 292 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 LMF1Q96S06 567 aa7.04□□□□□ -1.28
TRA2B-201ENST00000259043 ING1Q9UK53 422 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-201ENST00000259043 CEP170Q5SW79 1584 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 H7C1D1 291 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 CDC45O75419 566 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 DUSP8Q13202 625 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 PCOLCEQ15113 449 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 AGBL4Q5VU57 503 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 TCTN3Q6NUS6 607 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 OTOP2Q7RTS6 562 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 KIF18BQ86Y91 864 aa7.03□□□□□ -1.28
TRA2B-201ENST00000259043 SHROOM2Q13796 1616 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 ABCA5Q8WWZ7 1642 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 FOXS1O43638 330 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 F2P00734 622 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 CYP17A1P05093 508 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 ATP2A2P16615 1042 aaKnown RBP7.02□□□□□ -1.29
TRA2B-201ENST00000259043 RGS3P49796 1198 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 DSG1Q02413 1049 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 DALRD3Q5D0E6 543 aaKnown RBP7.02□□□□□ -1.29
TRA2B-201ENST00000259043 ESRP1Q6NXG1 681 aaKnown RBP7.02□□□□□ -1.29
TRA2B-201ENST00000259043 NIM1KQ8IY84 436 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 Q8TCH9 128 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 MAML3Q96JK9 1138 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 LRRC37BQ96QE4 947 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 ELF4Q99607 663 aaPredicted RBP7.02□□□□□ -1.29
TRA2B-201ENST00000259043 FEZ1Q99689 392 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 PCIF1Q9H4Z3 704 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 OXSMQ9NWU1 459 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 H2AFY2Q9P0M6 372 aaPredicted RBP7.02□□□□□ -1.29
TRA2B-201ENST00000259043 TBX22Q9Y458 520 aa7.02□□□□□ -1.29
TRA2B-201ENST00000259043 NUP160Q12769 1436 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 ENPP3O14638 875 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 ARHGAP6O43182 974 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 SLC9A1P19634 815 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 MRE11P49959 708 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 STAT5BP51692 787 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 RAC3P60763 192 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 SLC6A3Q01959 620 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 EPHA7Q15375 998 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 ZNF174Q15697 407 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 FILIP1Q7Z7B0 1213 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 TAX1BP1Q86VP1 789 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 WDR48Q8TAF3 677 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 E2F7Q96AV8 911 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 ZNF341Q9BYN7 854 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 OAZ3Q9UMX2 235 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 SPO11Q9Y5K1 396 aa7.01□□□□□ -1.29
TRA2B-201ENST00000259043 GRIN2AQ12879 1464 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 ZNF891A8MT65 544 aaPredicted RBP7□□□□□ -1.29
TRA2B-201ENST00000259043 KPNA6O60684 536 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 TGFB2P61812 414 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 HGFACQ04756 655 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 MYBPC3Q14896 1274 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 PCBP1Q15365 356 aaKnown RBP eCLIP7□□□□□ -1.29
TRA2B-201ENST00000259043 ZNF568Q3ZCX4 644 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 USP30Q70CQ3 517 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 DHX37Q8IY37 1157 aaKnown RBP7□□□□□ -1.29
TRA2B-201ENST00000259043 NXPE1Q8N323 547 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 TARS2Q9BW92 718 aaKnown RBP7□□□□□ -1.29
TRA2B-201ENST00000259043 OR10A2Q9H208 303 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 NR2E1Q9Y466 385 aa7□□□□□ -1.29
TRA2B-201ENST00000259043 UBA6A0AVT1 1052 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-201ENST00000259043 CR2P20023 1033 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 ANTXR2P58335 489 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 ROM1Q03395 351 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 FHL2Q14192 279 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 HS1BP3Q53T59 392 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 NOP9Q86U38 636 aaKnown RBP6.99□□□□□ -1.29
TRA2B-201ENST00000259043 FUKQ8N0W3 1084 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 DPYSL5Q9BPU6 564 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 ZMAT4Q9H898 229 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 ZFR2Q9UPR6 939 aaKnown RBP6.99□□□□□ -1.29
TRA2B-201ENST00000259043 PLAAQ9Y263 795 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 ABCA10Q8WWZ4 1543 aa6.99□□□□□ -1.29
TRA2B-201ENST00000259043 ABCC10Q5T3U5 1492 aa6.98□□□□□ -1.29
TRA2B-201ENST00000259043 NEK4P51957 841 aa6.98□□□□□ -1.29
TRA2B-201ENST00000259043 SEPT7Q16181 437 aaKnown RBP6.98□□□□□ -1.29
TRA2B-201ENST00000259043 TTC38Q5R3I4 469 aa6.98□□□□□ -1.29
TRA2B-201ENST00000259043 SLFN12LQ6IEE8 588 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms