RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KLHL29Q96CT2 875 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 MOCS2O96007 188 aaPredicted RBP20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 AP3B2Q13367 1082 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 SYCP2LQ5T4T6 812 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 CCDC195A0A1B0GUA6 201 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 FCER1AP12319 257 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 AKR1B1P15121 316 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 EPC1Q9H2F5 836 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 HOXC10Q9NYD6 342 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 FAM8A1Q9UBU6 413 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 FEM1BQ9UK73 627 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 PLAAQ9Y263 795 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 CDK12Q9NYV4 1490 aaPredicted RBP20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 ANO4Q32M45 955 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 TRMT10CQ7L0Y3 403 aaKnown RBP20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 XXYLT1Q8NBI6 393 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 SARS2Q9NP81 518 aaKnown RBP20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 ABHD10Q9NUJ1 306 aa20.02■□□□□ 0.8
SMARCC1-201ENST00000254480 KIF28PB7ZC32 967 aa20.02■□□□□ 0.79
SMARCC1-201ENST00000254480 GCNAQ96QF7 691 aa20.02■□□□□ 0.79
SMARCC1-201ENST00000254480 CYTH2Q99418 400 aa20.02■□□□□ 0.79
SMARCC1-201ENST00000254480 ESYT3A0FGR9 886 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 M0QYV0 167 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 PHEXP78562 749 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 OCRLQ01968 901 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 PDIK1LQ8N165 341 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 AFG1LQ8WV93 481 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 GSG1L2A8MUP6 293 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 GPC3P51654 580 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 CENPUQ71F23 418 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■■■ 54.9
SMARCC1-201ENST00000254480 KRT82Q9NSB4 513 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 ARHGEF5Q12774 1597 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 EVI5O60447 810 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 NR1D1P20393 614 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 ART3Q13508 389 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 PPP4R4Q6NUP7 873 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 FAM81BQ96LP2 452 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 HDAC6Q9UBN7 1215 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 PPP1R9AQ9ULJ8 1098 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 POLR3FQ9H1D9 316 aaPredicted RBP20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 Q9H521 79 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 A0A0G2JND7 137 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 TEX33O43247 280 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 SURF1Q15526 300 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 FAM47EQ6ZV65 393 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 LXNQ9BS40 222 aa20.01■□□□□ 0.79
SMARCC1-201ENST00000254480 NUGGCQ68CJ6 796 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 MB21D2Q8IYB1 491 aaPredicted RBP20■□□□□ 0.79
SMARCC1-201ENST00000254480 PIP4K2CQ8TBX8 421 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 SPATA33Q96N06 139 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 TTC37Q6PGP7 1564 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 SYNDIG1LA6NDD5 238 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 PRAMEF18Q5VWM3 479 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 NFRKBQ6P4R8 1299 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 TTC1Q99614 292 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 UBE4BO95155 1302 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 MGEA5O60502 916 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 NSUN6Q8TEA1 469 aaKnown RBP20■□□□□ 0.79
SMARCC1-201ENST00000254480 TTC25Q96NG3 672 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 ZBBXA8MT70 800 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 PPFIA2O75334 1257 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
SMARCC1-201ENST00000254480 FAM217BQ9NTX9 383 aaPredicted RBP20■□□□□ 0.79
SMARCC1-201ENST00000254480 HUS1O60921 280 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 KIF19Q2TAC6 998 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 FBXO38Q6PIJ6 1188 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 KDELC2Q7Z4H8 507 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 ELAC2Q9BQ52 826 aaKnown RBP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 TMEM259Q4ZIN3 620 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 RSBN1LQ6PCB5 846 aaPredicted RBP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 EFCAB13Q8IY85 973 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 MMP19Q99542 508 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 NUP85Q9BW27 656 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 RRP15Q9Y3B9 282 aaKnown RBP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 TJP3O95049 919 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 FAM84BQ96KN1 310 aaPredicted RBP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 XAB2Q9HCS7 855 aaKnown RBP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 LDHAP00338 332 aaKnown RBP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 VAMP7P51809 220 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 HMGCS2P54868 508 aa19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 IPO5O00410 1097 aaKnown RBP19.99■□□□□ 0.79
SMARCC1-201ENST00000254480 THEM5Q8N1Q8 247 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 FSD1LQ9BXM9 530 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 RGL1Q9NZL6 768 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 PHKA2P46019 1235 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 SIK2Q9H0K1 926 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 EPS15L1Q9UBC2 864 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 SCINQ9Y6U3 715 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 CFAP74Q9C0B2 1584 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 LGALS16A8MUM7 142 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 GRM4Q14833 912 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 DRAP1Q14919 205 aaPredicted RBP19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 NFIXQ14938 502 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 RPAP3Q9H6T3 665 aaPredicted RBP19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 CEP72Q9P209 647 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 A0A0G2JLW4 131 aa19.98■□□□□ 0.79
SMARCC1-201ENST00000254480 ZRANB2O95218 330 aaKnown RBP eCLIP19.98■□□□□ 0.794e-12■■■■■ 42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms