RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 VIMP08670 466 aaKnown RBP16.17■□□□□ 0.18
UBE4B-201ENST00000253251 CASC4Q6P4E1 433 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 BBS5Q8N3I7 341 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 NFIAQ12857 509 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
UBE4B-201ENST00000253251 CXCL9Q07325 125 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 SPDYE2Q495Y8 402 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 ERICH1Q86X53 443 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 C7orf31Q8N865 590 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
UBE4B-201ENST00000253251 FAM213AQ9BRX8 229 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 MKNK1Q9BUB5 465 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 GH1P01241 217 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 PPM1FP49593 454 aaPredicted RBP16.16■□□□□ 0.18
UBE4B-201ENST00000253251 EPHB4P54760 987 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 SAMD7Q7Z3H4 446 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 FAM149B1Q96BN6 582 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 C17orf75Q9HAS0 396 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 ARL4AP40617 200 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 GCLMP48507 274 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 ZNF699Q32M78 642 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 KATNAL1Q9BW62 490 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 INTS2Q9H0H0 1204 aaKnown RBP16.16■□□□□ 0.18
UBE4B-201ENST00000253251 CAPN11Q9UMQ6 739 aa16.16■□□□□ 0.18
UBE4B-201ENST00000253251 OSTNP61366 133 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 IQCB1Q15051 598 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 ERO1BQ86YB8 467 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 SIX6OS1Q8N1H7 587 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 HEXIM2Q96MH2 286 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 A0A1B0GTH6 734 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 LRRC53A6NM62 1247 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 H7C0C1 242 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 GAS2O43903 313 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 GGPS1O95749 300 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 PLS3P13797 630 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 ATP5OP48047 213 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 RFX6Q8HWS3 928 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 DPF2Q92785 391 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 DONSONQ9NYP3 566 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 RGL1Q9NZL6 768 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 AGO2Q9UKV8 859 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 NDUFAB1O14561 156 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 PFDN6O15212 129 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 FOXN1O15353 648 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 MOCS3O95396 460 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 MYBL1P10243 752 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 RWDD2BP57060 319 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 PRPSAP1Q14558 356 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 GLE1Q53GS7 698 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 DSTYKQ6XUX3 929 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 BZW1Q7L1Q6 419 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 ADGRA1Q86SQ6 560 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 SCFD2Q8WU76 684 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 PPM1EQ8WY54 764 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 TNPO2O14787 897 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 ECEL1O95672 775 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 GPC5P78333 572 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 TAF1CQ15572 869 aaPredicted RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 SGO2Q562F6 1265 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 ANKRD40Q6AI12 368 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 RSRC2Q7L4I2 434 aaKnown RBP16.15■□□□□ 0.18
UBE4B-201ENST00000253251 ENGASEQ8NFI3 743 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 SLC38A10Q9HBR0 1119 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 GAKO14976 1311 aa16.15■□□□□ 0.18
UBE4B-201ENST00000253251 KRT1P04264 644 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 SLC12A2P55011 1212 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 GUCY2DQ02846 1103 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 PTPAQ15257 358 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 Q3C1V9 767 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 OR6B2Q6IFH4 312 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 RHPN2Q8IUC4 686 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 GOLGA8SH3BPF8 625 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 MCF2LO15068 1137 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 CD58P19256 250 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 SREBF1P36956 1147 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 BACE1P56817 501 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 CYP27A1Q02318 531 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 NTRK3Q16288 839 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 FBXL13Q8NEE6 735 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 CCDC151A5D8V7 595 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 PRPSAP2O60256 369 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 TM4SF1P30408 202 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 DACT2Q5SW24 774 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 ATG4CQ96DT6 458 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 ZFYVE28Q9HCC9 887 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 PRKAG2Q9UGJ0 569 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.14■□□□□ 0.17
UBE4B-201ENST00000253251 ENC1O14682 589 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 DUOXA2Q1HG44 320 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 DPH5Q9H2P9 285 aa16.14■□□□□ 0.17
UBE4B-201ENST00000253251 PPANQ9NQ55 473 aaKnown RBP16.14■□□□□ 0.17
UBE4B-201ENST00000253251 TYW5A2RUC4 315 aaKnown RBP16.13■□□□□ 0.17
UBE4B-201ENST00000253251 I3L4J1 428 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 OAS2P29728 719 aaKnown RBP16.13■□□□□ 0.17
UBE4B-201ENST00000253251 THEM5Q8N1Q8 247 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 TMEM60Q9H2L4 133 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms