RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 RRP36Q96EU6 259 aaKnown RBP16.97■□□□□ 0.31
KNSTRN-201ENST00000249776 CDK5RAP3Q96JB5 506 aa16.97■□□□□ 0.31
KNSTRN-201ENST00000249776 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
KNSTRN-201ENST00000249776 NOX5Q96PH1 765 aa16.97■□□□□ 0.31
KNSTRN-201ENST00000249776 NAP1L4Q99733 375 aaKnown RBP16.97■□□□□ 0.31
KNSTRN-201ENST00000249776 NDST4Q9H3R1 872 aa16.97■□□□□ 0.31
KNSTRN-201ENST00000249776 ATXN2Q99700 1313 aaKnown RBP16.97■□□□□ 0.31
KNSTRN-201ENST00000249776 CYBAP13498 195 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 GGCXP38435 758 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 KIF11P52732 1056 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 CFAP221Q4G0U5 840 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 CREG2Q8IUH2 290 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 CPXCR1Q8N123 301 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 EIF1ADQ8N9N8 165 aaKnown RBP16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 C1orf131Q8NDD1 294 aaKnown RBP16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 CHST13Q8NET6 341 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 DPF3Q92784 378 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 PAWRQ96IZ0 340 aaKnown RBP16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 SH3GL2Q99962 352 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 LRWD1Q9UFC0 647 aa16.96■□□□□ 0.31
KNSTRN-201ENST00000249776 USP8P40818 1118 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 MAGEA1P43355 309 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 FXR2P51116 673 aaKnown RBP eCLIP16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 NAPAP54920 295 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 SKOR1P84550 965 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 PDIA5Q14554 519 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 LHX8Q68G74 356 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 B4GALNT4Q76KP1 1039 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 SPATA4Q8NEY3 305 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 GPKOWQ92917 476 aaPredicted RBP eCLIP16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 OSBPL9Q96SU4 736 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 TMEM47Q9BQJ4 181 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 CAPS2Q9BXY5 557 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 LACRTQ9GZZ8 138 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 STIM2Q9P246 746 aa16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 DDX20Q9UHI6 824 aaKnown RBP16.96■□□□□ 0.3
KNSTRN-201ENST00000249776 MACROD2A1Z1Q3 448 aa16.95■□□□□ 0.3
KNSTRN-201ENST00000249776 SRRM3A6NNA2 597 aaPredicted RBP16.95■□□□□ 0.3
KNSTRN-201ENST00000249776 ZNF792Q3KQV3 632 aa16.95■□□□□ 0.3
KNSTRN-201ENST00000249776 C10orf76Q5T2E6 689 aa16.95■□□□□ 0.3
KNSTRN-201ENST00000249776 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
KNSTRN-201ENST00000249776 SIK3Q9Y2K2 1263 aa16.95■□□□□ 0.3
KNSTRN-201ENST00000249776 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
KNSTRN-201ENST00000249776 CES2O00748 559 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 SRGAP2O75044 1071 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 CNGA1P29973 690 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 PAK2Q13177 524 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 TKFCQ3LXA3 575 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 C8orf74Q6P047 294 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 MICALCLQ6ZW33 695 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 KCTD1Q719H9 257 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 CACNA2D4Q7Z3S7 1137 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 C11orf49Q9H6J7 331 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 RIPK3Q9Y572 518 aa16.94■□□□□ 0.3
KNSTRN-201ENST00000249776 RBAK-RBAKDNI3L0D1 243 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 SEPT4O43236 478 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 PGK2P07205 417 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 C2orf54Q08AI8 447 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 STK4Q13043 487 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 IFI16Q16666 785 aaKnown RBP16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 SND1Q7KZF4 910 aaKnown RBP eCLIP16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 DIS3LQ8TF46 1054 aaKnown RBP16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 CEP63Q96MT8 703 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 LCMT1Q9UIC8 334 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 PRR12Q9ULL5 1215 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 KLRF2D3W0D1 207 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 EIF4A3P38919 411 aaKnown RBP16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 LETM2Q2VYF4 491 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 PPP1R18Q6NYC8 613 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 PDXDC1Q6P996 788 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 BTNL9Q6UXG8 535 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 TRPV1Q8NER1 839 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 LARP4BQ92615 738 aaKnown RBP16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 TINF2Q9BSI4 451 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 ACAD9Q9H845 621 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 BMP2KQ9NSY1 1161 aaPredicted RBP16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 CEP72Q9P209 647 aa16.93■□□□□ 0.3
KNSTRN-201ENST00000249776 ATP8B3O60423 1300 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 ALPK3Q96L96 1907 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 RCCD1A6NED2 376 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 AGPSO00116 658 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 EIF3HO15372 352 aaKnown RBP eCLIP16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 ZEB2O60315 1214 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 EVI5O60447 810 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 SERPING1P05155 500 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 IRAK1P51617 712 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 KRT79Q5XKE5 535 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 TYW1BQ6NUM6 668 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 ZNF467Q7Z7K2 595 aaPredicted RBP16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 CD302Q8IX05 232 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 REXO1Q8N1G1 1221 aaKnown RBP16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 STAG2Q8N3U4 1231 aa16.92■□□□□ 0.3
KNSTRN-201ENST00000249776 MREGQ8N565 214 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms