RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 ARFGAP2Q8N6H7 521 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 ATP6V1G3Q96LB4 118 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 NACC1Q96RE7 527 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 TEKT3Q9BXF9 490 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 GOLGA6L7A0A1B0GV03 622 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 ARP10275 920 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 LMNB1P20700 586 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 TMOD1P28289 359 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 TADA2BQ86TJ2 420 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 CAVIN3Q969G5 261 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 PLIN4Q96Q06 1357 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 TBX3O15119 743 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 POLD1P28340 1107 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 HOXA7P31268 230 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 HOXD13P35453 343 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 GJC1P36383 396 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 HSD17B3P37058 310 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 PRELPP51888 382 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 CORO7P57737 925 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 EFCAB13Q8IY85 973 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 GLG1Q92896 1179 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 PLCB1Q9NQ66 1216 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 GDF3Q9NR23 364 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 TNRC6CQ9HCJ0 1690 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 ATMINO43313 823 aaPredicted RBP13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 HIP1RO75146 1068 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 LSP1P33241 339 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 CEP55Q53EZ4 464 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 NSMFQ6X4W1 530 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 B4GALNT4Q76KP1 1039 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 CPLX4Q7Z7G2 160 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 SLITRK3O94933 977 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 BCRP11274 1271 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 JAG1P78504 1218 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 SETQ01105 290 aaPredicted RBP13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 MICALCLQ6ZW33 695 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 WDR18Q9BV38 432 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 THAP2Q9H0W7 228 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 LARSQ9P2J5 1176 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 EMSYQ7Z589 1322 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 TGFB1I1O43294 461 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 SLCO1A2P46721 670 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 NOVP48745 357 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 SPIRE1Q08AE8 756 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 Q4G0T1 1027 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 MRPL11Q9Y3B7 192 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-201ENST00000247833 LAMB2P55268 1798 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 EP400Q96L91 3159 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 C21orf2O43822 256 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 KRT5P13647 590 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 FBXW10Q5XX13 1052 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 PADI6Q6TGC4 694 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 LENG9Q96B70 501 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 AGPAT3Q9NRZ7 376 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 TAS2R14Q9NYV8 317 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 STK24Q9Y6E0 443 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 TMEM150BA6NC51 233 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 FOXN3O00409 490 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 CYP3A7P24462 503 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 MAGOHP61326 146 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 CUL1Q13616 776 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 FAM102BQ5T8I3 360 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 SIAH1Q8IUQ4 282 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 CCDC105Q8IYK2 499 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 MAGOHBQ96A72 148 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 FMO2Q99518 471 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 ISCUQ9H1K1 167 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 F8VZ95 297 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 RPS6KA5O75582 802 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 PPP1R37O75864 691 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 EIF2AK2P19525 551 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 VPS41P49754 854 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 MARSP56192 900 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 DR1Q01658 176 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 AADACL2Q6P093 401 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
RAB3IP-201ENST00000247833 RUBCNQ92622 972 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms