RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 GRAPQ13588 217 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 SLFN13Q68D06 897 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 FAM196AQ6ZSG2 479 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.51
SGPP1-201ENST00000247225 ADAMTSL3P82987 1691 aa18.27■□□□□ 0.51
SGPP1-201ENST00000247225 RBAK-RBAKDNI3L0D1 243 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 MYO1EQ12965 1108 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 MTMR3Q13615 1198 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 ALG3Q92685 438 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 KDM3AQ9Y4C1 1321 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 ANKS4BQ8N8V4 417 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 CCDC63Q8NA47 563 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 CCDC127Q96BQ5 260 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 PWWP2AQ96N64 755 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 PLCD4Q9BRC7 762 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 GEMIN8Q9NWZ8 242 aaKnown RBP18.26■□□□□ 0.51
SGPP1-201ENST00000247225 TIAM2Q8IVF5 1701 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 H0YGN5 161 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 CREB1P16220 341 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 SMTNP53814 917 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 ACCSLQ4AC99 568 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 LRRC57Q8N9N7 239 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 C1orf54Q8WWF1 131 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 SLC12A6Q9UHW9 1150 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 NFS1Q9Y697 457 aa18.26■□□□□ 0.51
SGPP1-201ENST00000247225 GPR75-ASB3A0A0A6YYF3 556 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 TCRBV7S2A1N4TA0A589 114 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 FOXN3O00409 490 aaPredicted RBP18.25■□□□□ 0.51
SGPP1-201ENST00000247225 EML1O00423 815 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 EEF2P13639 858 aaKnown RBP18.25■□□□□ 0.51
SGPP1-201ENST00000247225 GCLMP48507 274 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 PPP4CP60510 307 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 SEPT2Q15019 361 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 EPC2Q52LR7 807 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 CBWD3Q5JTY5 395 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 CBWD5Q5RIA9 395 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 NEK9Q8TD19 979 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 SLC35C1Q96A29 364 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 NGLY1Q96IV0 654 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 CACNA1SQ13698 1873 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 FAM86B1E9PN63 330 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 UPP2O95045 317 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 FTLP02792 175 aaPredicted RBP18.25■□□□□ 0.51
SGPP1-201ENST00000247225 FAM86B2P0C5J1 330 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 TNFRSF8P28908 595 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 HOXD13P35453 343 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 ODR4Q5SWX8 454 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 SPATS2Q86XZ4 545 aaKnown RBP18.25■□□□□ 0.51
SGPP1-201ENST00000247225 TAB3Q8N5C8 712 aaPredicted RBP18.25■□□□□ 0.51
SGPP1-201ENST00000247225 KCNV2Q8TDN2 545 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 SUFUQ9UMX1 484 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 BIRC3Q13489 604 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 HS2ST1Q7LGA3 356 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 JAMLQ86YT9 394 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 SYCE1Q8N0S2 351 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 ACTRT1Q8TDG2 376 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 PRCCQ92733 491 aaPredicted RBP18.25■□□□□ 0.51
SGPP1-201ENST00000247225 SYN2Q92777 582 aaPredicted RBP18.25■□□□□ 0.51
SGPP1-201ENST00000247225 KAT5Q92993 513 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 ASIC3Q9UHC3 531 aa18.25■□□□□ 0.51
SGPP1-201ENST00000247225 TOGARAM1Q9Y4F4 1720 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 GSTTP1A0A1W2PQM5 241 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 NEBLO76041 1014 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 TRIM37O94972 964 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 NEDD9Q14511 834 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
SGPP1-201ENST00000247225 RAB17Q9H0T7 212 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 FRMD4BQ9Y2L6 1034 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 ALG6Q9Y672 507 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 DDX60Q8IY21 1712 aaKnown RBP18.24■□□□□ 0.51
SGPP1-201ENST00000247225 SLC12A3P55017 1021 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 MTM1Q13496 603 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 EPHA7Q15375 998 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 FAM178BQ8IXR5 827 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 MREGQ8N565 214 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 DYDC2Q96IM9 177 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 P2RX7Q99572 595 aaKnown RBP18.24■□□□□ 0.51
SGPP1-201ENST00000247225 FAM114A2Q9NRY5 505 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 ABCF3Q9NUQ8 709 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 CTNNAL1Q9UBT7 734 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 PCDHA2Q9Y5H9 948 aa18.24■□□□□ 0.51
SGPP1-201ENST00000247225 DAB2IPQ5VWQ8 1189 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 FAM47EQ6ZV65 393 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 BANK1Q8NDB2 785 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 SLC30A5Q8TAD4 765 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 RNF25Q96BH1 459 aaPredicted RBP18.23■□□□□ 0.51
SGPP1-201ENST00000247225 KCNQ5Q9NR82 932 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 CEP83Q9Y592 693 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 CCDC188H7C350 402 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 DCAF12L1Q5VU92 463 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 NUGGCQ68CJ6 796 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 HOOK3Q86VS8 718 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 CD302Q8IX05 232 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 PPM1KQ8N3J5 372 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms