RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 KRT12Q99456 494 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 CAPN9O14815 690 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 FDX1P10109 184 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 FCER1AP12319 257 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.523e-8■■■■□ 21.7
COPA-201ENST00000241704 CLUL1Q15846 466 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
COPA-201ENST00000241704 SEC16BQ96JE7 1060 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 NOVA2Q9UNW9 492 aaKnown RBP11.83□□□□□ -0.52
COPA-201ENST00000241704 STXBP3O00186 592 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 KRT14P02533 472 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 SMARCA1P28370 1054 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 C9orf131Q5VYM1 1079 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 TTBK2Q6IQ55 1244 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 FAM43BQ6ZT52 329 aaPredicted RBP11.83□□□□□ -0.52
COPA-201ENST00000241704 CEP128Q6ZU80 1094 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 FUKQ8N0W3 1084 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
COPA-201ENST00000241704 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 PDS5AQ29RF7 1337 aaKnown RBP11.83□□□□□ -0.52
COPA-201ENST00000241704 CAND2O75155 1236 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 CXCR5P32302 372 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 ZBED6P86452 979 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 TAOK1Q7L7X3 1001 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 PPM1KQ8N3J5 372 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 NDST4Q9H3R1 872 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 POLD4Q9HCU8 107 aa11.83□□□□□ -0.52
COPA-201ENST00000241704 CHCHD3Q9NX63 227 aaKnown RBP11.83□□□□□ -0.52
COPA-201ENST00000241704 TDP2O95551 362 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 RPS12P25398 132 aaKnown RBP11.82□□□□□ -0.52
COPA-201ENST00000241704 ABCD1P33897 745 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 SPATA4Q8NEY3 305 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 RAD54LQ92698 747 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 USTQ9Y2C2 406 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 UTP11Q9Y3A2 253 aaKnown RBP11.82□□□□□ -0.52
COPA-201ENST00000241704 CLIC2O15247 247 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 FXR1P51114 621 aaKnown RBP eCLIP11.82□□□□□ -0.525e-7■■■■□ 23.1
COPA-201ENST00000241704 PPP2R2AP63151 447 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 CUL3Q13618 768 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 CCDC14Q49A88 953 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 PRAMEF18Q5VWM3 479 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 DTNBP1Q96EV8 351 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
COPA-201ENST00000241704 SCOCQ9UIL1 159 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 AMFRQ9UKV5 643 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 CNTNAP5Q8WYK1 1306 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 NFAT5O94916 1531 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 TCRBV5S4A2TA0A5A2 114 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 FAM205CA6NFA0 338 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 ACTN4O43707 911 aaKnown RBP11.82□□□□□ -0.52
COPA-201ENST00000241704 SUN1O94901 812 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 SRGNP10124 158 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 SCTRP47872 440 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 CCNHP51946 323 aaPredicted RBP11.82□□□□□ -0.52
COPA-201ENST00000241704 ALCAMQ13740 583 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 SREK1Q8WXA9 508 aaKnown RBP11.82□□□□□ -0.52
COPA-201ENST00000241704 AGXT2Q9BYV1 514 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 ITIH6Q6UXX5 1313 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 GNAT1P11488 350 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 ABCB4P21439 1286 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 KCNB1Q14721 858 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 MMGT1Q8N4V1 131 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 TEX9Q8N6V9 391 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 CCSER1Q9C0I3 900 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 ACAD9Q9H845 621 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 NHEJ1Q9H9Q4 299 aaPredicted RBP11.82□□□□□ -0.52
COPA-201ENST00000241704 TBC1D22BQ9NU19 505 aa11.82□□□□□ -0.52
COPA-201ENST00000241704 SLIT3O75094 1523 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 PP2D1A8MPX8 630 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 RGS16O15492 202 aaPredicted RBP11.81□□□□□ -0.52
COPA-201ENST00000241704 CELF2O95319 508 aaKnown RBP11.81□□□□□ -0.52
COPA-201ENST00000241704 ANP32DO95626 131 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 NDUFB10O96000 172 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 FERP16591 822 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 PRELPP51888 382 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 MYL7Q01449 175 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 MTMR1Q13613 665 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 PDIA5Q14554 519 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 ZNF70Q9UC06 446 aaPredicted RBP11.81□□□□□ -0.52
COPA-201ENST00000241704 ZNF185O15231 689 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 PFDN1O60925 122 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 COPB2P35606 906 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 PRCPP42785 496 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 JAK3P52333 1124 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 LAMB3Q13751 1172 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 VGLL2Q8N8G2 317 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 NLRP4Q96MN2 994 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 KCNK9Q9NPC2 374 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 INTS9Q9NV88 658 aaKnown RBP11.81□□□□□ -0.52
COPA-201ENST00000241704 GGA2Q9UJY4 613 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 E9PMD0 336 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms