RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 TFAP4Q01664 338 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 ZNF543Q08ER8 600 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 CRHR2Q13324 411 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 ORC1Q13415 861 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 C1orf53Q5VUE5 145 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 RASGRP2Q7LDG7 609 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 TTC30AQ86WT1 665 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 TCEAL8Q8IYN2 117 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 TTC30BQ8N4P2 665 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 AFAP1L2Q8N4X5 818 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 SHCBP1Q8NEM2 672 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 NEK9Q8TD19 979 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 TRMT2BQ96GJ1 504 aaKnown RBP4.03□□□□□ -1.76
UFM1-201ENST00000239878 HINFPQ9BQA5 517 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 DNAJC25Q9H1X3 360 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 ZNF287Q9HBT7 754 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 PDE11AQ9HCR9 933 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 TXNRD2Q9NNW7 524 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 LUZP4Q9P127 313 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 RBPJLQ9UBG7 517 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 FAM169AQ9Y6X4 670 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 ZHX2Q9Y6X8 837 aa4.03□□□□□ -1.76
UFM1-201ENST00000239878 TNKSO95271 1327 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 CCL15-CCL14A0A0B4J2E2 113 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 PDHXO00330 501 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 IPO5O00410 1097 aaKnown RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 FOXN1O15353 648 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 PPP1R11O60927 126 aaPredicted RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 SSBP05455 408 aaKnown RBP eCLIP4.02□□□□□ -1.77
UFM1-201ENST00000239878 SERPINB3P29508 390 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 FNTAP49354 379 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 IQCB1Q15051 598 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 DBN1Q16643 649 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 CCL15Q16663 113 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 FAM110CQ1W6H9 321 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 GRAMD1BQ3KR37 738 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 FAM47AQ5JRC9 791 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 TMC6Q7Z403 805 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ATCAYQ86WG3 371 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 FAM81AQ8TBF8 368 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ESR2Q92731 530 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 SHDQ96IW2 340 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 TMEM87BQ96K49 555 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 DHRS1Q96LJ7 313 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 CENPOQ9BU64 300 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 TRIM55Q9BYV6 548 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ASCC2Q9H1I8 757 aaPredicted RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 RIOX1Q9H6W3 641 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 PPCSQ9HAB8 311 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 SLC38A10Q9HBR0 1119 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 KBTBD4Q9NVX7 518 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 CLIC5Q9NZA1 410 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 BTBD7Q9P203 1132 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 PPP1R9AQ9ULJ8 1098 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ABT1Q9ULW3 272 aaKnown RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 DOLKQ9UPQ8 538 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 CAPN7Q9Y6W3 813 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ASTN1O14525 1302 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 B4E1Z4 1266 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 PRDM1O75626 825 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ZNF189O75820 626 aaPredicted RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 F2P00734 622 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 SLC3A2P08195 630 aaKnown RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 RPSAP08865 295 aaKnown RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 VARSP26640 1264 aaKnown RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 HMGCS2P54868 508 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 KRT32Q14532 448 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 TAF1CQ15572 869 aaPredicted RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 NTRK3Q16288 839 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 RRP12Q5JTH9 1297 aaKnown RBP4.02□□□□□ -1.77
UFM1-201ENST00000239878 CCDC183Q5T5S1 534 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 C16orf46Q6P387 395 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 C16orf54Q6UWD8 224 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 MFSD6Q6ZSS7 791 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 DRC7Q8IY82 874 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ABRAQ8N0Z2 381 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 FAM169BQ8N8A8 192 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 CNNM3Q8NE01 707 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 TAF4BQ92750 862 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 NACA2Q9H009 215 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 SLC39A2Q9NP94 309 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 GJD2Q9UKL4 321 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 LRFN2Q9ULH4 789 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 TMEM98Q9Y2Y6 226 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ELP1O95163 1332 aa4.02□□□□□ -1.77
UFM1-201ENST00000239878 ALG1L2C9J202 215 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 F5H6K3 240 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 VWA5AO00534 786 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 CYTH3O43739 400 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 PIP5K1CO60331 668 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 HOXC6P09630 235 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 HAND2P61296 217 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 KLRC3Q07444 240 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 SPP2Q13103 211 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 GRB14Q14449 540 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 E2F5Q15329 346 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 CWF19L1Q69YN2 538 aaKnown RBP4.01□□□□□ -1.77
UFM1-201ENST00000239878 RUFY3Q7L099 469 aa4.01□□□□□ -1.77
UFM1-201ENST00000239878 DHX32Q7L7V1 743 aaKnown RBP4.01□□□□□ -1.77
UFM1-201ENST00000239878 CRACR2BQ8N4Y2 399 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms