RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 TTC3P53804 2025 aa14.36□□□□□ -0.11
PDZD11-201ENST00000239666 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 DENND3A2RUS2 1198 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 HOXA2O43364 376 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 LPXNO60711 386 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 CD52P31358 61 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 BMPR1AP36894 532 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 CSPP1Q1MSJ5 1256 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 TCTN1Q2MV58 587 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 TMCO2Q7Z6W1 182 aaPredicted RBP14.35□□□□□ -0.11
PDZD11-201ENST00000239666 CMTR2Q8IYT2 770 aaKnown RBP14.35□□□□□ -0.11
PDZD11-201ENST00000239666 METTL13Q8N6R0 699 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 ADAMTS19Q8TE59 1207 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 CLP1Q92989 425 aaKnown RBP14.35□□□□□ -0.11
PDZD11-201ENST00000239666 P2RX5Q93086 422 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 FAM20AQ96MK3 541 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 UHRF1Q96T88 793 aaPredicted RBP14.35□□□□□ -0.11
PDZD11-201ENST00000239666 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
PDZD11-201ENST00000239666 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 MTUS1Q9ULD2 1270 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 PCDHB7Q9Y5E2 793 aa14.35□□□□□ -0.11
PDZD11-201ENST00000239666 CHD7Q9P2D1 2997 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 TBX3O15119 743 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 MSH4O15457 936 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 MARCH6O60337 910 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 PFKFB2O60825 505 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 DGKIO75912 1065 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 BAG4O95429 457 aaKnown RBP14.34□□□□□ -0.11
PDZD11-201ENST00000239666 ZSCAN20P17040 1043 aaPredicted RBP14.34□□□□□ -0.11
PDZD11-201ENST00000239666 NFX1Q12986 1120 aaKnown RBP14.34□□□□□ -0.11
PDZD11-201ENST00000239666 XKR3Q5GH77 459 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 PPP4R3AQ6IN85 833 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 SLC24A5Q71RS6 500 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 KIAA0319LQ8IZA0 1049 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 GDPD5Q8WTR4 605 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 INO80BQ9C086 356 aaPredicted RBP14.34□□□□□ -0.11
PDZD11-201ENST00000239666 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
PDZD11-201ENST00000239666 EVPLQ92817 2033 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 EPOPA6NHQ4 379 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 BMP1P13497 986 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 SARSP49591 514 aaKnown RBP14.33□□□□□ -0.12
PDZD11-201ENST00000239666 TBC1D8BQ0IIM8 1120 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 STK3Q13188 491 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 TRIM29Q14134 588 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 SWT1Q5T5J6 900 aaKnown RBP14.33□□□□□ -0.12
PDZD11-201ENST00000239666 MIER3Q7Z3K6 550 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 SLFN12Q8IYM2 578 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 LENG9Q96B70 501 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
PDZD11-201ENST00000239666 C17orf80Q9BSJ5 609 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 NSUN3Q9H649 340 aaKnown RBP14.33□□□□□ -0.12
PDZD11-201ENST00000239666 ELAC1Q9H777 363 aaKnown RBP14.33□□□□□ -0.12
PDZD11-201ENST00000239666 GINS2Q9Y248 185 aa14.33□□□□□ -0.12
PDZD11-201ENST00000239666 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 PSMD10O75832 226 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 C22orf31O95567 290 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 CTNNB1P35222 781 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 TMEM62Q0P6H9 643 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 EFCAB12Q6NXP0 572 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 NEK8Q86SG6 692 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 RASGRP4Q8TDF6 673 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 TRAPPC12Q8WVT3 735 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 MBOAT7Q96N66 472 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 REPIN1Q9BWE0 567 aaKnown RBP14.32□□□□□ -0.12
PDZD11-201ENST00000239666 NIFKQ9BYG3 293 aaKnown RBP14.32□□□□□ -0.12
PDZD11-201ENST00000239666 AGO3Q9H9G7 860 aaKnown RBP14.32□□□□□ -0.12
PDZD11-201ENST00000239666 PRDM6Q9NQX0 595 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 RGS18Q9NS28 235 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 DACT1Q9NYF0 836 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 DDX25Q9UHL0 483 aaKnown RBP14.32□□□□□ -0.12
PDZD11-201ENST00000239666 AKT3Q9Y243 479 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 PCDHB12Q9Y5F1 795 aa14.32□□□□□ -0.12
PDZD11-201ENST00000239666 LOXHD1Q8IVV2 1947 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.31□□□□□ -0.12
PDZD11-201ENST00000239666 M0R2N6 131 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 ARHGEF15O94989 841 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 SKIP12755 728 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 EIF4BP23588 611 aaKnown RBP14.31□□□□□ -0.12
PDZD11-201ENST00000239666 PSMC5P62195 406 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 UBE3AQ05086 875 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 SCRN1Q12765 414 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 PDE12Q6L8Q7 609 aaKnown RBP14.31□□□□□ -0.12
PDZD11-201ENST00000239666 OTUD6AQ7L8S5 288 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 TMUB1Q9BVT8 246 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 C1QTNF1Q9BXJ1 281 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 CHST12Q9NRB3 414 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 ST3GAL5Q9UNP4 418 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 NCOR1O75376 2440 aa14.31□□□□□ -0.12
PDZD11-201ENST00000239666 GAS2O43903 313 aaKnown RBP14.3□□□□□ -0.12
PDZD11-201ENST00000239666 ATP4AP20648 1035 aa14.3□□□□□ -0.12
PDZD11-201ENST00000239666 PRKCEQ02156 737 aa14.3□□□□□ -0.12
PDZD11-201ENST00000239666 BMS1Q14692 1282 aaKnown RBP14.3□□□□□ -0.12
PDZD11-201ENST00000239666 LETM2Q2VYF4 491 aa14.3□□□□□ -0.12
PDZD11-201ENST00000239666 LEXMQ3ZCV2 418 aa14.3□□□□□ -0.12
PDZD11-201ENST00000239666 ANKK1Q8NFD2 765 aa14.3□□□□□ -0.12
PDZD11-201ENST00000239666 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
PDZD11-201ENST00000239666 SCLT1Q96NL6 688 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms