RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 USP40Q9NVE5 1235 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 TMEM59LQ9UK28 342 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 PCDHA1Q9Y5I3 950 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 PCDHAC2Q9Y5I4 1007 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 PLIN4Q96Q06 1357 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 GNA14O95837 355 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 PON1P27169 355 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 FLT3P36888 993 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 CACNB3P54284 484 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 GIT2Q14161 759 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 TCERG1LQ5VWI1 586 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 HVCN1Q96D96 273 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 REEP2Q9BRK0 252 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 NOD2Q9HC29 1040 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 LRRC4BQ9NT99 713 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 NAGPAQ9UK23 515 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 PLAAQ9Y263 795 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 DNM1LO00429 736 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 SMIM24O75264 130 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 ITGA4P13612 1032 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 SPIRE1Q08AE8 756 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 ALKBH5Q6P6C2 394 aaKnown RBP10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 CYP2W1Q8TAV3 490 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 UBLCP1Q8WVY7 318 aaPredicted RBP10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 SELENOSQ9BQE4 189 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 LUC7LQ9NQ29 371 aaKnown RBP10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 ARMCX3Q9UH62 379 aaPredicted RBP10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 KDM3AQ9Y4C1 1321 aa10.21□□□□□ -0.77
HLA-DOA-201ENST00000229829 MEIS2O14770 477 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 SPATA31C1P0DKV0 1188 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 EXOC3L4Q17RC7 722 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 CRY2Q49AN0 593 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 ARHGAP27Q6ZUM4 889 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLF2Q8IX21 1173 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 METTL13Q8N6R0 699 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZNF513Q8N8E2 541 aaPredicted RBP10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 LRRC57Q8N9N7 239 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 CCDC63Q8NA47 563 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 LTBP3Q9NS15 1303 aa10.21□□□□□ -0.78
HLA-DOA-201ENST00000229829 TMCO5BA8MYB1 307 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 SERPINB2P05120 415 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 UAP1Q16222 522 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZC3H3Q8IXZ2 948 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 TAF4BQ92750 862 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 LBHD1Q9BQE6 289 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 DNAJC18Q9H819 358 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 LRRC4CQ9HCJ2 640 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 SMCHD1A6NHR9 2005 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 FAM86B1E9PN63 330 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 SART1O43290 800 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 AFPP02771 609 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 PDHA1P08559 390 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 FAM86B2P0C5J1 330 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 HSD17B3P37058 310 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 MDH1P40925 334 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 USP11P51784 963 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 IFFO1Q0D2I5 559 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 TCP10Q12799 353 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 DOK7Q18PE1 504 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 KNOP1Q1ED39 458 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 KDM7AQ6ZMT4 941 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 CCDC50Q8IVM0 306 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 MREGQ8N565 214 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 ATP6V1G3Q96LB4 118 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 TAF1DQ9H5J8 278 aaPredicted RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 AMACRQ9UHK6 382 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 PCDHB13Q9Y5F0 798 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 ANP32DO95626 131 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 TNNC1P63316 161 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 EDRF1Q3B7T1 1238 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 USH1GQ495M9 461 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 GPATCH4Q5T3I0 446 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 CDC42EP5Q6NZY7 148 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 SPATS2Q86XZ4 545 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 CELF4Q9BZC1 486 aaKnown RBP10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 TRIM31Q9BZY9 425 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 SIX2Q9NPC8 291 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 CD2APQ9Y5K6 639 aa10.2□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZBTB39O15060 712 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 SNUPNO95149 360 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 XRCC5P13010 732 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 EEF2P13639 858 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 SCTRP47872 440 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 IFNAR2P48551 515 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 ARHGAP4P98171 946 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 QPCTQ16769 361 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 RPUSD2Q8IZ73 545 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 TPCN2Q8NHX9 752 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 UHMK1Q8TAS1 419 aaKnown RBP10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 ETNPPLQ8TBG4 499 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 PSMD1Q99460 953 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 RUSC1Q9BVN2 902 aa10.19□□□□□ -0.78
HLA-DOA-201ENST00000229829 PPP1R12CQ9BZL4 782 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms