RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 PNMA5Q96PV4 448 aa16.35■□□□□ 0.21
PCOLCE-201ENST00000223061 XPNPEP1Q9NQW7 623 aa16.35■□□□□ 0.21
PCOLCE-201ENST00000223061 SLC4A7Q9Y6M7 1214 aa16.35■□□□□ 0.21
PCOLCE-201ENST00000223061 LAMA3Q16787 3333 aa16.35■□□□□ 0.21
PCOLCE-201ENST00000223061 GAS2O43903 313 aaKnown RBP16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 YEATS4O95619 227 aa16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 GRB10Q13322 594 aa16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 TCP11Q8WWU5 503 aa16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 PRPF31Q8WWY3 499 aaKnown RBP16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 PSPC1Q8WXF1 523 aaKnown RBP16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 CALML4Q96GE6 196 aa16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
PCOLCE-201ENST00000223061 RPS6KA5O75582 802 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 KCNJ6P48051 423 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 NFX1Q12986 1120 aaKnown RBP16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 KARSQ15046 597 aaKnown RBP16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 HYIQ5T013 277 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 FAM109BQ6ICB4 259 aaPredicted RBP16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 USP49Q70CQ1 688 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 USP38Q8NB14 1042 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 EPSTI1Q96J88 318 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 NT5C3AQ9H0P0 336 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 GPRC5CQ9NQ84 441 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 CFAP45Q9UL16 551 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 PADI3Q9ULW8 664 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 COL4A3BPQ9Y5P4 624 aa16.33■□□□□ 0.21
PCOLCE-201ENST00000223061 A0A087WZ62 844 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 ABHD14A-ACY1A0A1B0GW23 586 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 EYA4O95677 639 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 SSBP05455 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 SRGAP2CP0DJJ0 459 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 WDR5P61964 334 aaKnown RBP16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 LAMTOR4Q0VGL1 99 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 LRIT3Q3SXY7 679 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 TMEM119Q4V9L6 283 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 ATL3Q6DD88 541 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 ZNF710Q8N1W2 664 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 SYMPKQ92797 1274 aaKnown RBP16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 APBB2Q92870 758 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 FDXACB1Q9BRP7 624 aaPredicted RBP16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 POLR3FQ9H1D9 316 aaPredicted RBP16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 SQORQ9Y6N5 450 aa16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 MORC2Q9Y6X9 1032 aaPredicted RBP16.33■□□□□ 0.2
PCOLCE-201ENST00000223061 GRXCR1A8MXD5 290 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 SOX1O00570 391 aaPredicted RBP16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 PPP6R2O75170 966 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 ATP2A2P16615 1042 aaKnown RBP16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 EIF4BP23588 611 aaKnown RBP16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 DDIT3P35638 169 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 DEFB103AP81534 67 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 CDC42EP1Q00587 391 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 FAM102BQ5T8I3 360 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 FAM228AQ86W67 206 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 GCOM2Q9BZD3 368 aaPredicted RBP16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 ST3GAL5Q9UNP4 418 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 LAMA2P24043 3122 aaKnown RBP16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 TET1Q8NFU7 2136 aa16.32■□□□□ 0.2
PCOLCE-201ENST00000223061 SLC26A4O43511 780 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 EFCAB14O75071 495 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 DARSP14868 501 aaKnown RBP16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 CYP11B2P19099 503 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 PLCG1P19174 1290 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 FGFR4P22455 802 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 TXLNAP40222 546 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 NUCB2P80303 420 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 TMCO2Q7Z6W1 182 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 ZNF410Q86VK4 478 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 ASAP3Q8TDY4 903 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 CCSER1Q9C0I3 900 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 POLD4Q9HCU8 107 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 ERVK-5Q9HDB9 667 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 ATP6V1DQ9Y5K8 247 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 GPR182O15218 404 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 ARL2P36404 184 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 ME1P48163 572 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 KRT85P78386 507 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 MXD4Q14582 209 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 RNF149Q8NC42 400 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 LRCH3Q96II8 777 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 RUSC1Q9BVN2 902 aa16.31■□□□□ 0.2
PCOLCE-201ENST00000223061 EVPLQ92817 2033 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 SIP14410 1827 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 ASAP2O43150 1006 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 AMHP03971 560 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 PLA2G4BP0C869 781 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 GLRA2P23416 452 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 RABGGTBP53611 331 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 DHX8Q14562 1220 aaKnown RBP16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 SLC9A7Q96T83 725 aa16.3■□□□□ 0.2
PCOLCE-201ENST00000223061 TMX1Q9H3N1 280 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms