RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 K7ENM7 598 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 MEFVO15553 781 aaPredicted RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 SMIM24O75264 130 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 GNA14O95837 355 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 FTCDO95954 541 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 EIF4A3P38919 411 aaKnown RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 HDLBPQ00341 1268 aaKnown RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 STK4Q13043 487 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 SNCBQ16143 134 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 TRIM58Q8NG06 486 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 OR2W6PQ8NHA6 318 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 POLR3CQ9BUI4 534 aaPredicted RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 DDX4Q9NQI0 724 aaKnown RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 CDC25CP30307 473 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 ZNF543Q08ER8 600 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 RCN1Q15293 331 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 EXOC3L4Q17RC7 722 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 HIBCHQ6NVY1 386 aaPredicted RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 UNC13DQ70J99 1090 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 NLRX1Q86UT6 975 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 RNPC3Q96LT9 517 aaKnown RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 FNBP1Q96RU3 617 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 TSC22D3Q99576 134 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 LARSQ9P2J5 1176 aaKnown RBP11.41□□□□□ -0.58
VPS18-201ENST00000220509 MAD2L2Q9UI95 211 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 PLCH1Q4KWH8 1693 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 FAM205AQ6ZU69 1335 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 MYBL1P10243 752 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 STAT1P42224 750 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 TNNC1P63316 161 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 XKR9Q5GH70 373 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 PRAMEF18Q5VWM3 479 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 SLC43A3Q8NBI5 491 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 TEKT3Q9BXF9 490 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 RIC8AQ9NPQ8 531 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 IL17RBQ9NRM6 502 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 HAUS2Q9NVX0 235 aa11.41□□□□□ -0.58
VPS18-201ENST00000220509 PLEKP08567 350 aaPredicted RBP11.4□□□□□ -0.58
VPS18-201ENST00000220509 CTNNA2P26232 953 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 NT5C2P49902 561 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 PAPOLAP51003 745 aaKnown RBP11.4□□□□□ -0.58
VPS18-201ENST00000220509 PPP4CP60510 307 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 TNFAIP1Q13829 316 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 RPS6KA1Q15418 735 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 CRY2Q49AN0 593 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 ARHGEF16Q5VV41 709 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 ANKRD40Q6AI12 368 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 AGAP3Q96P47 875 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 MED15Q96RN5 788 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 MYO1AQ9UBC5 1043 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 NDUFB5O43674 189 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 IL4RP24394 825 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 EHHADHQ08426 723 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 KCNA1Q09470 495 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 PEX26Q7Z412 305 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 ADAT2Q7Z6V5 191 aaKnown RBP11.4□□□□□ -0.58
VPS18-201ENST00000220509 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 ZIM3Q96PE6 472 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 CCSER1Q9C0I3 900 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 RETREG1Q9H6L5 497 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 HOMER3Q9NSC5 361 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 EIF2AK2P19525 551 aaKnown RBP11.4□□□□□ -0.58
VPS18-201ENST00000220509 TMOD1P28289 359 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 CUL3Q13618 768 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 UBE2Q1Q7Z7E8 422 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 IFT20Q8IY31 132 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 SPATA4Q8NEY3 305 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 PRMT6Q96LA8 375 aaPredicted RBP11.4□□□□□ -0.58
VPS18-201ENST00000220509 ZMAT2Q96NC0 199 aaKnown RBP11.4□□□□□ -0.58
VPS18-201ENST00000220509 ZNF341Q9BYN7 854 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 IMPG2Q9BZV3 1241 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 GGT7Q9UJ14 662 aa11.4□□□□□ -0.58
VPS18-201ENST00000220509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.4□□□□□ -0.58
VPS18-201ENST00000220509 A0A087X0B3 334 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 KCNK3O14649 394 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 SLC26A4O43511 780 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 SPOPO43791 374 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 LSP1P33241 339 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 CARSP49589 748 aaKnown RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 EPHB4P54760 987 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 CFAP221Q4G0U5 840 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 WDR93Q6P2C0 686 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 SAMD3Q8N6K7 520 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 PCIF1Q9H4Z3 704 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 ADAMTS1Q9UHI8 967 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 STK38LQ9Y2H1 464 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 CSPG5O95196 566 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 VIMP08670 466 aaKnown RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 VIL1P09327 827 aaKnown RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 CNGA1P29973 690 aa11.39□□□□□ -0.59
VPS18-201ENST00000220509 HOXA10P31260 410 aaPredicted RBP11.39□□□□□ -0.59
VPS18-201ENST00000220509 IFNAR2P48551 515 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms