RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 WDR64B1ANS9 1081 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 MSH4O15457 936 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 HOXA2O43364 376 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 TMOD1P28289 359 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 PLPP4Q5VZY2 271 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 ZNF598Q86UK7 904 aaKnown RBP17.82■□□□□ 0.44
NME3-201ENST00000219302 BRF1Q92994 677 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 PHKBQ93100 1093 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 ASIC4Q96FT7 647 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 PHOX2BQ99453 314 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 TCF25Q9BQ70 676 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 NGRNQ9NPE2 291 aaKnown RBP17.82■□□□□ 0.44
NME3-201ENST00000219302 DISC1Q9NRI5 854 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 NRBP2Q9NSY0 501 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 AKT3Q9Y243 479 aa17.82■□□□□ 0.44
NME3-201ENST00000219302 A0A0U1RQF3 1178 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 OATP04181 439 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 DARSP14868 501 aaKnown RBP17.81■□□□□ 0.44
NME3-201ENST00000219302 ZSCAN20P17040 1043 aaPredicted RBP17.81■□□□□ 0.44
NME3-201ENST00000219302 PBX3P40426 434 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 TECP42680 631 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 GPC3P51654 580 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 FGD1P98174 961 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 SIGLEC14Q08ET2 396 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 TARBP2Q15633 366 aaKnown RBP17.81■□□□□ 0.44
NME3-201ENST00000219302 CLLU1OSQ5K130 101 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 FBXL6Q8N531 539 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 ZNF668Q96K58 619 aaPredicted RBP17.81■□□□□ 0.44
NME3-201ENST00000219302 ZNF558Q96NG5 402 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 MAP7D2Q96T17 732 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 RIT2Q99578 217 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 SAMM50Q9Y512 469 aa17.81■□□□□ 0.44
NME3-201ENST00000219302 WDR81Q562E7 1941 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 CDC45O75419 566 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 EOMESO95936 686 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 HOXB8P17481 243 aaPredicted RBP17.8■□□□□ 0.44
NME3-201ENST00000219302 PPM1AP35813 382 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 USP11P51784 963 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 KRT17Q04695 432 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 UGCGQ16739 394 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 LRRC43Q8N309 656 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 MRPL43Q8N983 215 aaKnown RBP17.8■□□□□ 0.44
NME3-201ENST00000219302 BICD2Q8TD16 824 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 SLC5A5Q92911 643 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 CEP89Q96ST8 783 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 SPG21Q9NZD8 308 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 TCEAL9Q9UHQ7 104 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 SNX14Q9Y5W7 946 aa17.8■□□□□ 0.44
NME3-201ENST00000219302 CACNA1HO95180 2353 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 STBD1O95210 358 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 SRGAP2BP0DMP2 458 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 FGFR4P22455 802 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 HSPA4P34932 840 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 PRKCEQ02156 737 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 TCF15Q12870 199 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 PTPN21Q16825 1174 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 TMC7Q7Z402 723 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 ABI1Q8IZP0 508 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 CCDC136Q96JN2 1154 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 JAKMIP1Q96N16 626 aaKnown RBP17.79■□□□□ 0.44
NME3-201ENST00000219302 PRRX2Q99811 253 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 APOL5Q9BWW9 433 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 RNF26Q9BY78 433 aaPredicted RBP17.79■□□□□ 0.44
NME3-201ENST00000219302 ENTPD7Q9NQZ7 604 aa17.79■□□□□ 0.44
NME3-201ENST00000219302 C2orf71A6NGG8 1288 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 IFNAR1P17181 557 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 SFNP31947 248 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 EVCP57679 992 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 DRP2Q13474 957 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 LLGL2Q6P1M3 1020 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 BLOC1S2Q6QNY1 142 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 B3GNT9Q6UX72 402 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
NME3-201ENST00000219302 SUGP1Q8IWZ8 645 aaKnown RBP17.78■□□□□ 0.44
NME3-201ENST00000219302 GJA10Q969M2 543 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 NIFKQ9BYG3 293 aaKnown RBP17.78■□□□□ 0.44
NME3-201ENST00000219302 UNC45AQ9H3U1 944 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 VPS54Q9P1Q0 977 aa17.78■□□□□ 0.44
NME3-201ENST00000219302 MYO10Q9HD67 2058 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 IGKV6-21A0A0C4DH24 114 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 CSDE1O75534 798 aaKnown RBP17.77■□□□□ 0.44
NME3-201ENST00000219302 PSMD10O75832 226 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 RPS6KB1P23443 525 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 JAK3P52333 1124 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 PTPN5P54829 565 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 AKAP17AQ02040 695 aaKnown RBP17.77■□□□□ 0.44
NME3-201ENST00000219302 RNF169Q8NCN4 708 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 CCDC148Q8NFR7 591 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 HELQQ8TDG4 1101 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 CASP10Q92851 521 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 TRAIPQ9BWF2 469 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 SLC26A6Q9BXS9 759 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 SH3GLB2Q9NR46 395 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 CDH22Q9UJ99 828 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 HCFC2Q9Y5Z7 792 aa17.77■□□□□ 0.44
NME3-201ENST00000219302 GAS7O60861 476 aa17.76■□□□□ 0.43
NME3-201ENST00000219302 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
NME3-201ENST00000219302 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms