RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 UTP11Q9Y3A2 253 aaKnown RBP14.46□□□□□ -0.09
SRP54-201ENST00000216774 IGLV3-22A0A075B6J6 115 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 DAPK3O43293 454 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 BMP3P12645 472 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 ITGA4P13612 1032 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 NPR1P16066 1061 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 SNAP25P60880 206 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 ABCB5Q2M3G0 1257 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 PODNQ7Z5L7 613 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 TMC3Q7Z5M5 1100 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 OTUD6BQ8N6M0 293 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 CYP2W1Q8TAV3 490 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 KCND2Q9NZV8 630 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 SYNPO2Q9UMS6 1093 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 NRXN2Q9P2S2 1712 aa14.46□□□□□ -0.1
SRP54-201ENST00000216774 BUB1BO60566 1050 aaPredicted RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 FSBPO95073 299 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 RFX1P22670 979 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 ZNF131P52739 623 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 FKBP1AP62942 108 aaKnown RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 POU5F1Q01860 360 aaKnown RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 PPATQ06203 517 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 PPP2R5CQ13362 524 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 PTPROQ16827 1216 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 SH3BP5LQ7L8J4 393 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 HS2ST1Q7LGA3 356 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 OTOP1Q7RTM1 612 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 GLYCTKQ8IVS8 523 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 SLC35G2Q8TBE7 412 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 CTNNBL1Q8WYA6 563 aaPredicted RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 CARD9Q9H257 536 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 DMAC2Q9NW81 257 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 SLC12A6Q9UHW9 1150 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 DNAJC12Q9UKB3 198 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 FRMPD4Q14CM0 1322 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 ANKRD31Q8N7Z5 1873 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 MYO1FO00160 1098 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 TTI1O43156 1089 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 SLITRK3O94933 977 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 NMT1P30419 496 aaKnown RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 ALDH1B1P30837 517 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 HPDP32754 393 aaPredicted RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 CACNB3P54284 484 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 PTENP60484 403 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 DRAP1Q14919 205 aaPredicted RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 PIGOQ8TEQ8 1089 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 UBLCP1Q8WVY7 318 aaPredicted RBP14.45□□□□□ -0.1
SRP54-201ENST00000216774 RAB17Q9H0T7 212 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 CENPHQ9H3R5 247 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 BCAS3Q9H6U6 928 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 FRMD4BQ9Y2L6 1034 aa14.45□□□□□ -0.1
SRP54-201ENST00000216774 SFI1A8K8P3 1242 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 PSMD10O75832 226 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 FGGP02679 453 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 CTTNQ14247 550 aaKnown RBP14.44□□□□□ -0.1
SRP54-201ENST00000216774 ZNF720Q7Z2F6 126 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 KAT2BQ92831 832 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 GPR88Q9GZN0 384 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 TMX4Q9H1E5 349 aaPredicted RBP14.44□□□□□ -0.1
SRP54-201ENST00000216774 APEX2Q9UBZ4 518 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 ODF2LQ9ULJ1 636 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 E7EVH7 732 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 DDX3YO15523 660 aaKnown RBP14.44□□□□□ -0.1
SRP54-201ENST00000216774 SEC24CP53992 1094 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 EIF3BP55884 814 aaKnown RBP14.44□□□□□ -0.1
SRP54-201ENST00000216774 ZC2HC1CQ53FD0 456 aaPredicted RBP14.44□□□□□ -0.1
SRP54-201ENST00000216774 LRCH2Q5VUJ6 765 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 TPH2Q8IWU9 490 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 CNPY4Q8N129 248 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 OR2W6PQ8NHA6 318 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 SLC5A5Q92911 643 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 GJD4Q96KN9 370 aaPredicted RBP14.44□□□□□ -0.1
SRP54-201ENST00000216774 FIZ1Q96SL8 496 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 INTS2Q9H0H0 1204 aaKnown RBP14.44□□□□□ -0.1
SRP54-201ENST00000216774 POLD4Q9HCU8 107 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 OSGEPQ9NPF4 335 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 AGPAT3Q9NRZ7 376 aa14.44□□□□□ -0.1
SRP54-201ENST00000216774 GOLGA6L10A0A0M3HER8 536 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 PPFIA2O75334 1257 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 TRIM37O94972 964 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 PAEPP09466 180 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 POLD1P28340 1107 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 FLT3P36888 993 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 HADHBP55084 474 aaKnown RBP14.43□□□□□ -0.1
SRP54-201ENST00000216774 PPP2R2AP63151 447 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 PLS1Q14651 629 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 SLC9A9Q8IVB4 645 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 FAM178BQ8IXR5 827 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 PRPF38AQ8NAV1 312 aaKnown RBP14.43□□□□□ -0.1
SRP54-201ENST00000216774 DYDC2Q96IM9 177 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 NACC1Q96RE7 527 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 WDR18Q9BV38 432 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 PPP1R9AQ9ULJ8 1098 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 ATRNL1Q5VV63 1379 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 ANKRD62A6NC57 917 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 GMNCA6NCL1 334 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 TRAPPC3O43617 180 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 GDF11O95390 407 aa14.43□□□□□ -0.1
SRP54-201ENST00000216774 USP8P40818 1118 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms