RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CYP3A7P24462 503 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 NRIP1P48552 1158 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 NDUFV1P49821 464 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 GPC3P51654 580 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 SMAD2Q15796 467 aaKnown RBP16.89■□□□□ 0.29
UPK3A-201ENST00000216211 MTERF2Q49AM1 385 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 ADHFE1Q8IWW8 467 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 SH2D3AQ9BRG2 576 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 ELAC1Q9H777 363 aaKnown RBP16.89■□□□□ 0.29
UPK3A-201ENST00000216211 SEPT9Q9UHD8 586 aaPredicted RBP16.89■□□□□ 0.29
UPK3A-201ENST00000216211 CD207Q9UJ71 328 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 KCNJ14Q9UNX9 436 aa16.89■□□□□ 0.29
UPK3A-201ENST00000216211 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 DTNBO60941 627 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 FGF18O76093 207 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 SCRN1Q12765 414 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 DRP2Q13474 957 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 SMAD4Q13485 552 aaKnown RBP16.88■□□□□ 0.29
UPK3A-201ENST00000216211 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.29
UPK3A-201ENST00000216211 TARBP2Q15633 366 aaKnown RBP16.88■□□□□ 0.29
UPK3A-201ENST00000216211 INF2Q27J81 1249 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 THNSL1Q8IYQ7 743 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 EFHBQ8N7U6 833 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 RDM1Q8NG50 284 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 ETNPPLQ8TBG4 499 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 MICAL1Q8TDZ2 1067 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 NLRP7Q8WX94 980 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 MSLNLQ96KJ4 702 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 MBOAT7Q96N66 472 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 SCLT1Q96NL6 688 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 RNF19AQ9NV58 838 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 CLEC1BQ9P126 229 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 ARID2Q68CP9 1835 aa16.88■□□□□ 0.29
UPK3A-201ENST00000216211 SLC37A4O43826 429 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 STBD1O95210 358 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 ALADP13716 330 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 DARSP14868 501 aaKnown RBP16.87■□□□□ 0.29
UPK3A-201ENST00000216211 ERVFC1P60507 584 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 UBE3AQ05086 875 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 GALNT17Q6IS24 598 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 MOXD1Q6UVY6 613 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 LRRC55Q6ZSA7 311 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 KRT25Q7Z3Z0 450 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 ECHDC2Q86YB7 292 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 RNF169Q8NCN4 708 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 CASD1Q96PB1 797 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 CEP89Q96ST8 783 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 NIFKQ9BYG3 293 aaKnown RBP16.87■□□□□ 0.29
UPK3A-201ENST00000216211 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 TLR9Q9NR96 1032 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 DDX25Q9UHL0 483 aaKnown RBP16.87■□□□□ 0.29
UPK3A-201ENST00000216211 BARX2Q9UMQ3 279 aaPredicted RBP16.87■□□□□ 0.29
UPK3A-201ENST00000216211 HCN4Q9Y3Q4 1203 aa16.87■□□□□ 0.29
UPK3A-201ENST00000216211 PER2O15055 1255 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 DCXO43602 365 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 CSDE1O75534 798 aaKnown RBP16.86■□□□□ 0.29
UPK3A-201ENST00000216211 GLP2RO95838 553 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 LAG3P18627 525 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 PLA2G5P39877 138 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 LETM2Q2VYF4 491 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 XKR3Q5GH77 459 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 FAM177A1Q8N128 213 aaPredicted RBP16.86■□□□□ 0.29
UPK3A-201ENST00000216211 ZNF710Q8N1W2 664 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 FAM122AQ96E09 287 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 PHF20Q9BVI0 1012 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
UPK3A-201ENST00000216211 TLE6Q9H808 572 aa16.86■□□□□ 0.29
UPK3A-201ENST00000216211 TRIOO75962 3097 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 DDX11L8A8MPP1 907 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 HOXA2O43364 376 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 CDKL5O76039 1030 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 EYA4O95677 639 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 PBX3P40426 434 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 RBM10P98175 930 aaKnown RBP16.85■□□□□ 0.29
UPK3A-201ENST00000216211 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 ABI1Q8IZP0 508 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 GJB4Q9NTQ9 266 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
UPK3A-201ENST00000216211 A0A087WZ62 844 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 IGKV6-21A0A0C4DH24 114 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 CCDC194A0A1B0GVG4 234 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 PRR33A8MZF0 331 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 EML1O00423 815 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 FSCN2O14926 492 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 COASYQ13057 564 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 CLLU1OSQ5K130 101 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 KCNT2Q6UVM3 1135 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 ANO5Q75V66 913 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 SMRP1Q8NCR6 262 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 HELQQ8TDG4 1101 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 OXER1Q8TDS5 423 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 MRPS27Q92552 414 aaKnown RBP16.84■□□□□ 0.29
UPK3A-201ENST00000216211 POP1Q99575 1024 aaKnown RBP16.84■□□□□ 0.29
UPK3A-201ENST00000216211 FDXACB1Q9BRP7 624 aaPredicted RBP16.84■□□□□ 0.29
UPK3A-201ENST00000216211 GCOM2Q9BZD3 368 aaPredicted RBP16.84■□□□□ 0.29
UPK3A-201ENST00000216211 SUCLA2Q9P2R7 463 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms