RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Wdr64Q9D565 1086 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 JmyQ9QXM1 983 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rbm6S4R1W5 1118 aaKnown RBP9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Pitpnm2Q6ZPQ6 1335 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gbp6A0A0G2JDV3 611 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gm43302L7N1X8 611 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Acot10Q32MW3 439 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Garnl3Q3V0G7 1038 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 LrmpQ60664 539 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Slc9c1Q6UJY2 1175 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ckap2lQ7TS74 745 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 3830417A13RikQ8BQJ2 303 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Man2a2Q8BRK9 1152 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Usp38Q8BW70 1042 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Zfp449Q8CB76 518 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sugp1Q8CH02 643 aaKnown RBP9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Pkn3Q8K045 878 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Abcf3Q8K268 709 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 AslQ91YI0 464 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cabp7Q91ZM8 215 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Etnk1Q9D4V0 363 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ccdc124Q9D8X2 217 aaKnown RBP9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Capn12Q9ER56 720 aa9.5□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gm11549A0A286YD83 63 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ccdc78D3Z5T1 437 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cyp3a25O09158 503 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 EgfrQ01279 1210 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ckap2Q3V1H1 664 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Terb1Q8C0V1 768 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Angel2Q8K1C0 544 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Coq6Q8R1S0 476 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Senp2Q91ZX6 588 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ube2sQ921J4 223 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Xpo5Q924C1 1204 aaKnown RBP9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Plagl2Q925T4 496 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 NenfQ9CQ45 171 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ebf2O08792 575 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 CnpP16330 420 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 ProcP33587 460 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 LeprP48356 1162 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ephb2P54763 986 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Polr2fP61219 127 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Crnkl1P63154 690 aaKnown RBP9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rcn1Q05186 325 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Drp2Q05AA6 957 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Tmem35bQ3U0Y2 150 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gm10392Q3V3I3 114 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Thrap3Q569Z6 951 aaKnown RBP9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Mtus1Q5HZI1 1210 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Tbc1d9bQ5SVR0 1263 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Asap3Q5U464 904 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 P4ha1Q60715 534 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Mtss1lQ6P9S0 715 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Krt9Q6RHW0 743 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Usp8Q80U87 1080 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Slc12a8Q8VI23 705 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Snx24Q9CRB0 169 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Tmem47Q9JJG6 181 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Nlrp5Q9R1M5 1163 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Phf2Q9WTU0 1096 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gpr161B2RPY5 545 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gm1141B9EJU1 475 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gm2030D3Z7C4 212 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Chil3O35744 398 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 GapdhsQ64467 440 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ms4a5Q810P8 197 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rab11fip4Q8BQP8 635 aa9.49□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Krt78E9Q0F0 1068 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 A430078G23RikE9Q7Y4 484 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Zfp212G3X8R7 492 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Kcna3P16390 528 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Skiv2lQ6NZR5 1244 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Tmc4Q7TQ65 694 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sdccag8Q80UF4 717 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ints8Q80V86 995 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Pspc1Q8R326 523 aaKnown RBP9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ddx39aQ8VDW0 427 aaKnown RBP9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ndufv1Q91YT0 464 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 SmtnQ921U8 923 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Mzf1S4R1L6 814 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Als2Q920R0 1651 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 CfhP06909 1234 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Akr1b7P21300 316 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ccng1P51945 294 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rpusd2Q149F1 553 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Snx25Q3ZT31 840 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gm10488Q4KL05 212 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ppp2r5eQ61151 467 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gm14819Q62478 212 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Retreg2Q6NS82 541 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Lin7aQ8JZS0 233 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Bud13Q8R149 637 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Atp5c1Q91VR2 298 aaKnown RBP9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Gimap4Q99JY3 219 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Cd2apQ9JLQ0 637 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Kiaa0232Q80U59 1396 aaKnown RBP9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 N4bp2F8VQG7 1678 aaKnown RBP9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Scgb2b21A0A087WQA9 112 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 H2afzP0C0S6 128 aa9.48□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Wnt10bP48614 389 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms