RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ces1fQ91WU0 561 aa19.5■□□□□ 0.71
Trim71-201ENSMUST00000111816 Cdk9Q99J95 372 aa19.5■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ext2P70428 718 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Dnm3Q8BZ98 863 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Thoc1Q8R3N6 657 aaKnown RBP19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Gimap4Q99JY3 219 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Chd5A2A8L1 1946 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Krt24A1L317 512 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Rab17P35292 214 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Dnajc17Q91WT4 303 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Prmt3Q922H1 532 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Rnf31Q924T7 1066 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Rnf4Q9QZS2 194 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Foxp1P58462 705 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Mark3Q03141 753 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Sarm1Q6PDS3 724 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Chn2Q80XD1 332 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Trim47Q8C0E3 641 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Rcor2Q8C796 523 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Sec24cG3X972 1096 aaKnown RBP19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Plcg2Q8CIH5 1265 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 DtnaQ9D2N4 746 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Eif6O55135 245 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Cyp11b2P15539 500 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Atp9bP98195 1146 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Nrde2Q80XC6 1172 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Coro7Q9D2V7 922 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Gm8257E9Q8R3 264 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 Gucy1b2Q8BXH3 824 aa19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 H2afy2Q8CCK0 372 aaKnown RBP19.49■□□□□ 0.71
Trim71-201ENSMUST00000111816 1700024B05RikE9Q6D7 167 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Gad1P48318 593 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Zc3h15Q3TIV5 426 aaKnown RBP19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Trim45Q6PFY8 580 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ttc30a1Q99J38 664 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 AlcamQ61490 583 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Myl10Q62082 202 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 DohhA0A1Y7VJ29 135 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Plekhm3Q8BM47 761 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Nol6Q8R5K4 1152 aaKnown RBP19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ddx39aQ8VDW0 427 aaKnown RBP19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Slc9a5B2RXE2 898 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Arhgef25Q9CWR0 618 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Cog1Q9Z160 980 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 UrgcpQ5NCI0 926 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Oca2Q62052 833 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 ThegQ9JMB1 375 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Stag2O35638 1231 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Xlr3cQ61806 226 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Atp11bQ6DFW5 1175 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Gpbp1l1Q6NZP2 473 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Arfip2Q8K221 341 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Eif2b2Q99LD9 351 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 CenpkQ9ESN5 271 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Tulp1Q9Z273 543 aa19.48■□□□□ 0.71
Trim71-201ENSMUST00000111816 Gnat1P20612 350 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Sf3b3Q921M3 1217 aaKnown RBP19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Tex44Q9DA60 530 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Thap11Q9JJD0 305 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Crocc2F6XLV1 1638 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Pgk2P09041 417 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ptk2P34152 1090 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 PodnQ7TQ62 611 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Eif3hQ91WK2 352 aaKnown RBP19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Eif2ak1Q9Z2R9 619 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Cnot3Q8K0V4 751 aaKnown RBP19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 FtcdQ91XD4 541 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Glrx3Q9CQM9 337 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Pold3Q9EQ28 462 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ifi30Q9ESY9 248 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Zbtb38Q3LR78 1197 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 R3hdm2Q80TM6 1044 aaKnown RBP19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Hat1Q8BY71 416 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ano3A2AHL1 981 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Trim30bE9PVL6 203 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Aoc3O70423 765 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Pde6aP27664 859 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 IqcmQ149I8 489 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 VrtnQ3SYK4 740 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Rbbp7Q60973 425 aaKnown RBP19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ints4Q8CIM8 964 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Rpap2Q8VC34 614 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Plxnc1Q9QZC2 1574 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Prrg3Q6PAQ9 231 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Spata4Q8K3V1 295 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Kat2bQ9JHD1 813 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Sycp2Q9CUU3 1500 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Nsd3Q6P2L6 1439 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ccdc134Q8C7V8 229 aa19.47■□□□□ 0.71
Trim71-201ENSMUST00000111816 Prl7a2O54831 253 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Pde6bP23440 856 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Tmem165P52875 323 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Asap3Q5U464 904 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Pabpc4Q6PHQ9 660 aaKnown RBP19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Eps8l1Q8R5F8 716 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Capza2P47754 286 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Mfn2Q80U63 757 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Rbm42Q91V81 474 aaKnown RBP19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 CenpsQ9D084 142 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Pex11aQ9Z211 246 aa19.46■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms