RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Sucla2Q9Z2I9 463 aa13.66□□□□□ -0.22
Trim50-202ENSMUST00000111180 Smchd1Q6P5D8 2007 aaKnown RBP13.66□□□□□ -0.22
Trim50-202ENSMUST00000111180 Zfp984A2A7A2 547 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Ace3D0G895 737 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Gm5934D3Z4U6 212 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Zfp213E9QAW0 468 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Cd70O55237 195 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Got1P05201 413 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Hps5P59438 1126 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Nom1Q3UFM5 854 aaKnown RBP13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 AlcamQ61490 583 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Krt39Q6IFX4 482 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Adam6bQ6IMH7 756 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Naa35Q6PHQ8 725 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Bcas3Q8CCN5 928 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 MafaQ8CF90 359 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Mrgprx1Q8CIP3 322 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Olfr1494Q8VGP8 315 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Thap2Q9D305 217 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Eif4e3Q9DBB5 207 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Gon4lQ9DB00 2260 aa13.65□□□□□ -0.22
Trim50-202ENSMUST00000111180 Ncor1Q60974 2453 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Lcmt1A0A0U1RNF2 332 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Gm7086A0A1W2P766 342 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Vmn2r78K7N6U5 853 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Serpinb8O08800 374 aaKnown RBP13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Pip4k2aO70172 405 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Axin2O88566 840 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 GpiP06745 558 aaKnown RBP13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Acvr2bP27040 536 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Mcm5P49718 733 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Rnf19aP50636 840 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Hmgb1P63158 215 aaKnown RBP13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Gabpb2P81069 414 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Asnsd1Q8BFS9 627 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 OtoaQ8K561 1137 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 1700129C05RikQ9CQ77 218 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Q9CYI0 393 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Tbx18Q9EPZ6 613 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Cnpy2Q9QXT0 182 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Magi2Q9WVQ1 1275 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Col4a3Q9QZS0 1669 aa13.64□□□□□ -0.23
Trim50-202ENSMUST00000111180 Gm4907B1AXB9 411 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Taf4bG5E8Z2 855 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Cd68P31996 326 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 ZbbxQ0P5X5 716 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Kmt5aQ2YDW7 349 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Rufy4Q3TYX8 563 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Znf865Q3U3I9 1058 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Lrrc55Q3UY51 311 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Arhgap1Q5FWK3 439 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Plppr4Q7TME0 766 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Mtmr10Q7TPM9 771 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 LppQ8BFW7 613 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Fbxo44Q8BK26 255 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Map1sQ8C052 973 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Klhl30Q8C3F7 581 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 N4bp3Q8C7U1 537 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Tmem63cQ8CBX0 802 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Lrrc41Q8K1C9 807 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Taf6lQ8R2K4 616 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Cd2bp2Q9CWK3 342 aaKnown RBP13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Itga2bQ9QUM0 1033 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Mtmr1Q9Z2C4 669 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Robo3Q9Z2I4 1366 aa13.63□□□□□ -0.23
Trim50-202ENSMUST00000111180 Slc23a4A0A0J9YUX7 615 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 DgkkE9Q7N4 1118 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 P4hbP09103 509 aaKnown RBP13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Tpm2P58774 284 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 PtgdrP70263 357 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Zkscan4Q5SZT6 480 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Trmt13Q8BYH3 481 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Csgalnact2Q8C1F4 542 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Pym1Q8CHP5 203 aaKnown RBP13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Enox2Q8R0Z2 598 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Pcdhac2Q91Y09 1006 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 NptxrQ99J85 493 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Pls3Q99K51 630 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Q9D5Q8 446 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Arhgef7Q9ES28 862 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Mbtps1Q9WTZ2 1052 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Myh11O08638 1972 aa13.62□□□□□ -0.23
Trim50-202ENSMUST00000111180 Ttll6A4Q9E8 822 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Hcn4O70507 1186 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Tpm3P21107 285 aaKnown RBP13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Gna14P30677 355 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Etv6P97360 485 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Tarbp2P97473 365 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Smyd5Q3TYX3 416 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Defa-rs10Q64263 91 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Ctnna3Q65CL1 895 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Trim37Q6PCX9 961 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Cwf19l2Q8BG79 887 aaKnown RBP13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Bmp3Q8BHE5 468 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Cc2d1bQ8BRN9 848 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Adcy3Q8VHH7 1145 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Txndc5Q91W90 417 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Erich6bQ9D4S6 220 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 2310002L09RikQ9D7L5 217 aa13.61□□□□□ -0.23
Trim50-202ENSMUST00000111180 Knop1Q9Z2Q2 478 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms