RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 E330017A01RikQ8BU47 192 aa12.47□□□□□ -0.41
Vps54-202ENSMUST00000109578 Slc12a6Q924N4 1150 aa12.47□□□□□ -0.41
Vps54-202ENSMUST00000109578 Cse1lQ9ERK4 971 aaKnown RBP12.47□□□□□ -0.41
Vps54-202ENSMUST00000109578 Edf1Q9JMG1 148 aaKnown RBP12.47□□□□□ -0.41
Vps54-202ENSMUST00000109578 Slc30a9Q5IRJ6 567 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Cyfip2Q5SQX6 1253 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 DcakdQ8BHC4 231 aaKnown RBP12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Slc25a38Q91XD8 326 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Psma8Q9CWH6 250 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Ctnnbl1Q9CWL8 563 aaKnown RBP12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Rasgef1cQ9D300 466 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Pabpc6Q9D4E6 643 aaKnown RBP12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Cpne8Q9DC53 577 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Smchd1Q6P5D8 2007 aaKnown RBP12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Col11a2Q64739 1736 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 AaasP58742 546 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Prr7Q3V0I2 269 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Clul1Q3ZRW6 464 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Jade3Q6IE82 823 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Brd2Q7JJ13 798 aaKnown RBP12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 CalcbQ99MP3 130 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Snx24Q9CRB0 169 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Mageb16Q9CWV4 363 aa12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Gys1Q9Z1E4 738 aaKnown RBP12.46□□□□□ -0.41
Vps54-202ENSMUST00000109578 Hoxa11P31311 313 aa12.46□□□□□ -0.42
Vps54-202ENSMUST00000109578 Vps52Q8C754 723 aaKnown RBP12.46□□□□□ -0.42
Vps54-202ENSMUST00000109578 Cgref1Q8R1U2 281 aa12.46□□□□□ -0.42
Vps54-202ENSMUST00000109578 Klf15Q9EPW2 415 aa12.46□□□□□ -0.42
Vps54-202ENSMUST00000109578 MycbpQ9EQS3 103 aa12.46□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm2030D3Z7C4 212 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Got1P05201 413 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Serpina1bP22599 413 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Rassf10Q8BL43 508 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Tbc1d10cQ8C9V1 444 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 OtoaQ8K561 1137 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Cmtm5Q9D6G9 156 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Irx5Q9JKQ4 484 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Entpd5Q9WUZ9 427 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm14525B1AZA0 212 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm2012B1B0R1 212 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 ArP19091 899 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Fgfr4Q03142 799 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ddx49Q4FZF3 480 aaKnown RBP12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm14819Q62478 212 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Tas2r134Q7TQB0 298 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Trex1Q91XB0 314 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm382B1AXN3 1250 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Heatr4E9Q357 955 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Sema6bO54951 886 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Zbtb7bQ64321 544 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Cyp26b1Q811W2 512 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Q8C6G1 249 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Kat5Q8CHK4 513 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ctage5Q8R311 779 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Fam133bQ9CVI2 245 aaKnown RBP12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Cabp5Q9JLK3 173 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 1700018F24RikB2RW27 314 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm10110D3Z5M2 615 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Hspa1lP16627 641 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ccdc33Q3ULW6 985 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ttf2Q5NC05 1138 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ccdc134Q8C7V8 229 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 PpatQ8CIH9 517 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Dennd1aQ8K382 1016 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Appl2Q8K3G9 662 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 PhykplQ8R1K4 467 aa12.45□□□□□ -0.42
Vps54-202ENSMUST00000109578 Lrrc38A2VDH3 298 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 FosP01101 380 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Mgat1P27808 447 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Tex35Q14BK3 207 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ppp2r2aQ6P1F6 447 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Peg10Q7TN75 958 aaKnown RBP12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Bank1Q80VH0 783 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Rnaseh2bQ80ZV0 308 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Efcab14Q8BGQ6 484 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gpsm2Q8VDU0 679 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Pcdhgb4Q91XX6 912 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm3127E9Q9P5 263 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm3453K7N724 263 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Cyth3O08967 399 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Rgs9bpQ148R9 237 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 TraddQ3U0V2 310 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ccdc84Q4VA36 332 aaKnown RBP12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ugt1a9Q62452 528 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ssxb10Q6XAR7 170 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Lrrc42Q8R2U7 421 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Apbb1ipQ8R5A3 670 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Tdrd3Q91W18 743 aaKnown RBP12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ubr3Q5U430 1889 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Mtcl1Q3UHU5 1945 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm4907B1AXB9 411 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Adad1Q5SUE7 619 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gas7Q60780 421 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 EsrrbQ61539 433 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 TwistnbQ78WZ7 330 aaKnown RBP12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Fbxo10Q7TQF2 950 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Sugp2Q8CH09 1067 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Cyp2ab1S4R196 498 aa12.44□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gm8994E9PV04 411 aaKnown RBP12.43□□□□□ -0.42
Vps54-202ENSMUST00000109578 Trappc3O55013 180 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms