RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Agbl1Q09M05 972 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Gm14819Q62478 212 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Krt12Q64291 487 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Rassf6Q80UQ2 353 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Rpap2Q8VC34 614 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Q8VDP2 222 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Oxnad1Q8VE38 311 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Eif2ak1Q9Z2R9 619 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ttll10A4Q9F3 704 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Slc35g2D3YVE8 412 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Rpl13P47963 211 aaKnown RBP12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ephb4P54761 987 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Adad1Q5SUE7 619 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Kirrel3Q8BR86 778 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 IarsQ8BU30 1262 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Coa7Q921H9 231 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 CalcbQ99MP3 130 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Atp6v1e2Q9D593 226 aa12.53□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Dock5B2RY04 1868 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Vars2Q3U2A8 1060 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Zfp957Q3UT76 567 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Abl2Q4JIM5 1182 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Ttf2Q5NC05 1138 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Vmn1r209Q5NC97 312 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Trim47Q8C0E3 641 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Epn2Q8CHU3 595 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Zbed3Q9D0L1 228 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Azi2Q9QYP6 405 aa12.52□□□□□ -0.4
Col9a1-202ENSMUST00000088349 Smchd1Q6P5D8 2007 aaKnown RBP12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 March10E9PX79 788 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 ItgaeQ60677 1167 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ints2Q80UK8 1198 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ms4a5Q810P8 197 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cyp26b1Q811W2 512 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ythdf3Q8BYK6 585 aaKnown RBP12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Lrrc14Q8VC16 493 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 1700109H08RikQ9D9C0 210 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Vav3Q9R0C8 847 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ltbp2O08999 1813 aa12.52□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Atp2c2A7L9Z8 944 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Kif5cP28738 956 aaKnown RBP12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Sstr3P30935 428 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Sema3eP70275 775 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Atp2b4Q6Q477 1205 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Bicd1Q8BR07 835 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 SfpqQ8VIJ6 699 aaKnown RBP12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mcur1Q9CXD6 340 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cfap57Q9D180 1249 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Apba1B2RUJ5 842 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm10110D3Z5M2 615 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Meis2P97367 477 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pja2Q80U04 707 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm5622Q810Q0 167 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Psmd5Q8BJY1 504 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 SucoQ8C341 1250 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ces4aQ8R0W5 563 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Xpo6Q924Z6 1125 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Slc5a5Q99PN0 618 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cyp2ab1S4R196 498 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Slfn14V9GXG1 899 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rbbp6P97868 1790 aaKnown RBP12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm5737A0A140LI11 423 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 1700018F24RikB2RW27 314 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Trappc11B2RXC1 1133 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm5814J3QP80 125 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tagap1P0CAX8 505 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mgat1P27808 447 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cdc25aP48964 514 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 GssP51855 474 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Epb41l4aP52963 686 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rgs9bpQ148R9 237 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Rrp36Q3UFY0 244 aaKnown RBP12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Fgfr1opQ66JX5 399 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Nop53Q8BK35 484 aaKnown RBP12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ptrh1Q8BW00 204 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Iffo1Q8BXL9 562 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Dennd1aQ8K382 1016 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cep19Q9CQA8 163 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mrfap1Q9CQL7 125 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cpne8Q9DC53 577 aa12.51□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Hsf3D0VYS2 492 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Zc3h7bF8VPP8 982 aaKnown RBP12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Stk10O55098 966 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Vps41Q5KU39 853 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 GnptabQ69ZN6 1235 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ssxb10Q6XAR7 170 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 DcakdQ8BHC4 231 aaKnown RBP12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Fbxo28Q8BIG4 368 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ccdc134Q8C7V8 229 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gle1Q8R322 699 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Trex1Q91XB0 314 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pcdhgb4Q91XX6 912 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ftsj3Q9DBE9 838 aaKnown RBP12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tfr2Q9JKX3 798 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm8994E9PV04 411 aaKnown RBP12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ifi207E9Q3L4 978 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm3127E9Q9P5 263 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Gm3453K7N724 263 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Esr2O08537 530 aa12.5□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Il13ra2O88786 383 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms