RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Sema5bQ60519 1093 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ppp1r13bQ62415 1087 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Amer1Q7TS75 1132 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fut11Q8BHC9 489 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Kcnv1Q8BZN2 503 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Prpf31Q8CCF0 499 aaKnown RBP13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tceal5Q8CCT4 200 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Glis1Q8K1M4 789 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Upb1Q8VC97 393 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Dqx1Q924H9 718 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Scrn1Q9CZC8 414 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cyp2s1Q9DBX6 501 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Nap1l5Q9JJF0 156 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Akt3Q9WUA6 479 aa13.52□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 ThadaA8C756 1938 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Plin4O88492 1403 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Gm4907B1AXB9 411 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Gm3739L7N296 216 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Msh3P13705 1091 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Il4rP16382 810 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Pde6bP23440 856 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Psmc2P46471 433 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Git1Q68FF6 770 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Nudt16Q6P3D0 195 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 St18Q80TY4 1045 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fbxl21Q8BFZ4 434 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cdca8Q8BHX3 289 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fam78aQ8C552 283 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fam20aQ8CID3 541 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Adam33Q923W9 797 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Josd2Q9CR30 188 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Themis3Q9CU24 569 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Stx6Q9JKK1 255 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 CtsfQ9R013 462 aa13.51□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Nup210Q9QY81 1886 aaKnown RBP13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Col4a4Q9QZR9 1682 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fpr-rs4A4FUQ5 323 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 DgkhD3YXJ0 1156 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Bmp8aP34821 399 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Etv6P97360 485 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Upf3aQ3ULJ3 422 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Trpc6Q61143 930 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Colgalt2Q6NVG7 625 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Daam2Q80U19 1115 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cyth4Q80YW0 393 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ercc6lQ8BHK9 1240 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Stoml1Q8CI66 399 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tcf25Q8R3L2 676 aaKnown RBP13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Atg13Q91YI1 516 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Pramel1Q99MW3 458 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ino80bQ99PT3 375 aaKnown RBP13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ly6kQ9CWP4 154 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tlr6Q9EPW9 795 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Trim54Q9ERP3 366 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 B4galt4Q9JJ04 344 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Nr1h3Q9Z0Y9 445 aa13.5□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Irs2P81122 1321 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Gm4924A0A1B0GR71 966 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 MtrA6H5Y3 1253 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Krt36B1AQ75 473 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Slc16a2O70324 545 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Hcn4O70507 1186 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cd68P31996 326 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Resp18P47939 175 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Asprv1Q09PK2 339 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ogfod1Q3U0K8 545 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Grxcr1Q50H32 290 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 GmipQ6PGG2 971 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ppp1r9bQ6R891 817 aaKnown RBP13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Olfr1046Q7TR79 316 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Kansl1Q80TG1 1036 aaKnown RBP13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Gprc5aQ8BHL4 356 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cep85Q8BMK0 761 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Larp6Q8BN59 492 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Zdhhc14Q8BQQ1 489 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Csnk1g3Q8C4X2 424 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fbxo18Q8K2I9 1042 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Bbox1Q924Y0 387 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 NaspQ99MD9 773 aaKnown RBP13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 QpctQ9CYK2 362 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tube1Q9D6T1 475 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Eya4Q9Z191 616 aa13.49□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 CluhQ5SW19 1315 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fam209A2APA5 170 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tatdn2B7ZNL9 783 aaKnown RBP13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Kdelc2G5E897 503 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Clec11aO88200 328 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Casp14O89094 257 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fmr1P35922 614 aaKnown RBP13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Setd4P58467 439 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Sparcl1P70663 650 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Pnpla5Q32LZ8 432 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Smyd5Q3TYX3 416 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 E2f8Q58FA4 860 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Enpp3Q6DYE8 874 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Hdac4Q6NZM9 1076 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Mbtd1Q6P5G3 631 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Mtss1lQ6P9S0 715 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tor4aQ8BH02 426 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Thap3Q8BJ25 218 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms