RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Npdc1Q64322 332 aa12.2□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Lrch3Q8BVU0 778 aa12.2□□□□□ -0.46
Ckap2-201ENSMUST00000046916 LgsnQ8CIX8 563 aa12.2□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Klhl20Q8VCK5 604 aa12.2□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Nap1l5Q9JJF0 156 aa12.2□□□□□ -0.46
Ckap2-201ENSMUST00000046916 NagaQ9QWR8 415 aa12.2□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Fgd3O88842 733 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Atp11aP98197 1187 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Phactr1Q2M3X8 580 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 PnocQ64387 187 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 RragaQ80X95 313 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Aoc2Q812C9 757 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Wbp1lQ8BGW2 348 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 GlmnQ8BZM1 596 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Rbm19Q8R3C6 952 aaKnown RBP12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 RpainQ9CWY9 219 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Prpf4Q9DAW6 521 aaKnown RBP12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Clstn1Q9EPL2 979 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Stat2Q9WVL2 923 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Vmn2r78K7N6U5 853 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 CatspereP0DP43 985 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Nap1l1P28656 391 aaKnown RBP12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Ice2Q3UZ18 988 aaKnown RBP12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Miga1Q4QQM5 600 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Sco1Q5SUC9 284 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Sycp1Q62209 993 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Tpd52Q62393 224 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Churc1Q6DG52 112 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Rhbdf1Q6PIX5 856 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Ankrd24Q80VM7 985 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 AacsQ9D2R0 672 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Prpf40aQ9R1C7 953 aaKnown RBP12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Ttc6G3UYY4 1857 aa12.19□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Akr1c19G3X9Y6 323 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Zfpm1O35615 995 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Rad51bO35719 350 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Nploc4P60670 608 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 HmmrQ00547 794 aaKnown RBP12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Kcnma1Q08460 1209 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Ccdc84Q4VA36 332 aaKnown RBP12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Pde1cQ64338 706 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Spata2Q8K004 515 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Tut1Q8R3F9 869 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Pidd1Q9ERV7 915 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Cntnap2Q9CPW0 1332 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Gm7168A0AUV4 508 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Ccdc24E9PUW8 296 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 E9QMW4 1145 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Il27raO70394 623 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Lmnb2P21619 596 aaKnown RBP12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 FechP22315 420 aaKnown RBP12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Setd4P58467 439 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Ift20Q61025 132 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Haus6Q6NV99 933 aaKnown RBP12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Traf3ip3Q8C0G2 513 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Eps8l2Q99K30 729 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Kif17Q99PW8 1038 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Ccdc105Q9D4K7 499 aa12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 AdnpQ9Z103 1108 aaKnown RBP12.18□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Golgb1E9PVZ8 3238 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Adamts9E9PUN6 1931 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Apol6B7ZC55 329 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Prl2c2P04095 224 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 XlrP05531 208 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Capza3P70190 299 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Gpbp1l1Q6NZP2 473 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Rexo1Q7TT28 1213 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Naa15Q80UM3 865 aaKnown RBP12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 NkrfQ8BY02 690 aaKnown RBP12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Tmx4Q8C0L0 335 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Vcpip1Q8CDG3 1220 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Taco1Q8K0Z7 294 aaKnown RBP12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Matr3Q8K310 846 aaKnown RBP12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Dusp19Q8K4T5 220 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Msantd4Q91YU3 345 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Lrrc57Q9D1G5 239 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Homer1Q9Z2Y3 366 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Mia3Q8BI84 1930 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Odf2A3KGV1 830 aaKnown RBP12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 MtrA6H5Y3 1253 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Vmn2r79E9Q067 851 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Opa1P58281 960 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Hnrnph2P70333 449 aaKnown RBP12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Gjb6P70689 261 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 NfiaQ02780 532 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Sox10Q04888 466 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Nlrp4cQ3TKR3 982 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Clca4aQ6Q473 924 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Cc2d1bQ8BRN9 848 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Arhgef19Q8BWA8 802 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 AopepQ8BXQ6 817 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Rbm41Q8JZV4 413 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Spata17Q9D552 379 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Cul5Q9D5V5 780 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Fmnl1Q9JL26 1094 aa12.17□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Kif26aQ52KG5 1881 aa12.16□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Gm30191A0A0U1RNT7 187 aa12.16□□□□□ -0.46
Ckap2-201ENSMUST00000046916 A430078G23RikE9Q7Y4 484 aa12.16□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Lrrc32G3XA59 663 aa12.16□□□□□ -0.46
Ckap2-201ENSMUST00000046916 Hnrnph1O35737 449 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms