RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Asprv1Q09PK2 339 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Palb2Q3U0P1 1104 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Lrig2Q52KR2 1054 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Trim68Q8K243 485 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Vps37bQ8R0J7 285 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ttc13A0A1L1SSC7 844 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Mark3Q03141 753 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Zfp953Q3UPV7 304 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Capn13Q3UW68 665 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Scrn1Q9CZC8 414 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Usp31E9Q6Y8 1344 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Efna5O08543 228 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Nr1i3O35627 358 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 PrphP15331 475 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Npr3P70180 536 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 MlxipQ2VPU4 917 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Brd9Q3UQU0 596 aaKnown RBP12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Krt74Q6IFZ9 495 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Sp8Q8BMJ8 486 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Cdc26Q99JP4 85 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Atp13a1Q9EPE9 1200 aaKnown RBP12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Adam22Q9R1V6 904 aa12.77□□□□□ -0.37
Pcif1-201ENSMUST00000041643 RaraP11416 462 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Sycp3P70281 254 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 OcrlQ6NVF0 900 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Q80Y73 168 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Phka2Q8BWJ3 1235 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tor1aip2Q8BYU6 502 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Btbd7Q8CFE5 1130 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Depdc1aQ8CIG0 804 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Apobec3Q99J72 440 aaKnown RBP12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ercc4Q9QZD4 917 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Adamtsl3G3UXC7 1706 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Mpp3O88910 568 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ap1m1P35585 423 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Wnt10bP48614 389 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 FerP70451 823 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Fam47cQ14BE7 430 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 RilpQ5ND29 369 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Nell2Q61220 819 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 SucoQ8C341 1250 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 E4f1Q8CCE9 783 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Bco2Q99NF1 532 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Krt28A6BLY7 462 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc6D3YZP9 469 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Per2O54943 1257 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Rab20P35295 233 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Krt32Q62168 407 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ncoa7Q6DFV7 943 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tbc1d22aQ8R5A6 516 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Alas1Q8VC19 642 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tbx18Q9EPZ6 613 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 CenpkQ9ESN5 271 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Slc12a7Q9WVL3 1083 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Als2Q920R0 1651 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Adgrb1Q3UHD1 1582 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Fam81bA0A140LI28 432 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ttll10A4Q9F3 704 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Abcb1bP06795 1276 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tal1P22091 329 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Akr1b1P45376 316 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc114Q3UX62 658 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Klra7Q60654 280 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gba2Q69ZF3 918 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Prpsap2Q8R574 369 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Cnot8Q9D8X5 292 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 DcpsQ9DAR7 338 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Caln1Q9JJG7 219 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Itga2bQ9QUM0 1033 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 S1pr4Q9Z0L1 386 aa12.76□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Cd72P21855 354 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Dynlt1P51807 113 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Eef1dP57776 281 aaKnown RBP12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Fra10ac1Q8BP78 315 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ces4aQ8R0W5 563 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Slc25a38Q91XD8 326 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 PpanQ91YU8 470 aaKnown RBP12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Naaladl2A0A0N4SUJ3 795 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gm7995L7N2E4 160 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Map4k1P70218 827 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 4933427I04RikQ3V053 235 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 ItgaeQ60677 1167 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Trim65Q8BFW4 522 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Trim66Q924W6 1242 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tspan17Q9D7W4 270 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Myo1eE9Q634 1107 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Cct5P80316 541 aaKnown RBP12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Rasip1Q3U0S6 961 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Podxl2Q8CAE9 603 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ago4Q8CJF8 861 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Rpap3Q9D706 660 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Inpp4aQ9EPW0 939 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Lrrc63A6H694 637 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Lig1P37913 916 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 NfrkbQ6PIJ4 1296 aaKnown RBP12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc15Q8C9M2 810 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Nmrk1Q91W63 195 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc124Q9D8X2 217 aaKnown RBP12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Trpm3Q5F4S9 1721 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Hmgcs2P54869 508 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms