RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gimap5Q8BWF2 308 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 SucoQ8C341 1250 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Mageb16Q9CWV4 363 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ybx3Q9JKB3 361 aaKnown RBP14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Mmrn1B2RPV6 1210 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Gm45837F7D3W5 961 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Stk10O55098 966 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Abi2P62484 446 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Akap4Q60662 849 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Rasa3Q60790 834 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Jade3Q6IE82 823 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ces4aQ8R0W5 563 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Tesk2Q8VCT9 570 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Grhl1Q921D9 618 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Pde2aQ922S4 916 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Znf654Q9DAU9 571 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Cse1lQ9ERK4 971 aaKnown RBP14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Scgb2b20Q9JI02 112 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Znf354bQ9QXT9 601 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Lactbl1S4R213 581 aa14.54□□□□□ -0.08
Nup88-201ENSMUST00000035283 Gm6588E9Q3K0 461 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Pdk4O70571 412 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Tagap1P0CAX8 505 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Rpl13P47963 211 aaKnown RBP14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ptprn2P80560 1001 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ogfod1Q3U0K8 545 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Fgfr1opQ66JX5 399 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Dnajc8Q6NZB0 253 aaKnown RBP14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Fbxo38Q8BMI0 1194 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Agap1Q8BXK8 857 aaKnown RBP14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Eno4Q8C042 619 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Abcf3Q8K268 709 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Pstpip2Q99M15 334 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Cpne8Q9DC53 577 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Gtf2iQ9ESZ8 998 aaKnown RBP14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Eif2ak1Q9Z2R9 619 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Atp2c2A7L9Z8 944 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Tbc1d1Q60949 1255 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 IgflQ6B9Z0 140 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Lrrc14Q8VC16 493 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 F11Q91Y47 624 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Nup50Q9JIH2 466 aaKnown RBP14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Znf394Q9Z1D9 521 aa14.53□□□□□ -0.08
Nup88-201ENSMUST00000035283 Gm28360A0A087WR25 190 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 AoahO35298 574 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Casp4P70343 373 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Rsad1Q5SUV1 442 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Tm4sf1Q64302 202 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Inpp4bQ6P1Y8 924 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ssxb10Q6XAR7 170 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Tarsl2Q8BLY2 790 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ssr1Q9CY50 286 aaKnown RBP14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Cfap57Q9D180 1249 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Fthl17aQ9DAX0 182 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Capn12Q9ER56 720 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Znf704Q9ERQ3 566 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ccdc88cQ6VGS5 2009 aa14.52□□□□□ -0.08
Nup88-201ENSMUST00000035283 Skor2A7M7C7 1008 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gm10110D3Z5M2 615 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 RcvrnP34057 202 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 ItgaeQ60677 1167 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Hoxa13Q62424 386 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Trpm8Q8R4D5 1104 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Spc24Q9D083 201 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Zbed3Q9D0L1 228 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gtf2h1Q9DBA9 547 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Phf2Q9WTU0 1096 aa14.52□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ces1aE9PYP1 563 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 EporP14753 507 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 GclcP97494 637 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Creb1Q01147 341 aaKnown RBP14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Dph1Q5NCQ5 438 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Scarf1Q5ND28 820 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Lrig3Q6P1C6 1117 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ano5Q75UR0 904 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ece2Q80Z60 881 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Q8BGD0 127 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 SfpqQ8VIJ6 699 aaKnown RBP14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 MycnP03966 462 aaKnown RBP14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Krt8P11679 490 aaKnown RBP14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Nedd1P33215 660 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Terf1P70371 421 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Znf354cQ571J5 560 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Igf2bp2Q5SF07 592 aaKnown RBP14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gm5622Q810Q0 167 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Phf20Q8BLG0 1010 aaKnown RBP14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Yars2Q8BYL4 472 aaKnown RBP14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Efl1Q8C0D5 1127 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 AgpsQ8C0I1 645 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 PreplQ8C167 725 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Slc5a5Q99PN0 618 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Mcur1Q9CXD6 340 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Zfp646Q6NV66 1788 aa14.51□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gm8994E9PV04 411 aaKnown RBP14.5□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gm3127E9Q9P5 263 aa14.5□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gm3453K7N724 263 aa14.5□□□□□ -0.09
Nup88-201ENSMUST00000035283 Vcam1P29533 739 aa14.5□□□□□ -0.09
Nup88-201ENSMUST00000035283 Rab21P35282 222 aa14.5□□□□□ -0.09
Nup88-201ENSMUST00000035283 Traf5P70191 558 aa14.5□□□□□ -0.09
Nup88-201ENSMUST00000035283 Sf3b2Q3UJB0 878 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 95.1 ms