RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Scn9aQ62205 1984 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Gm14525B1AZA0 212 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Gm2012B1B0R1 212 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Slc35g2D3YVE8 412 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Siah1bQ06985 282 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Cyfip2Q5SQX6 1253 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Gm14819Q62478 212 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Brd2Q7JJ13 798 aaKnown RBP17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Rps6ka6Q7TPS0 764 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Ints2Q80UK8 1198 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Cgref1Q8R1U2 281 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 CalcbQ99MP3 130 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Capn15Q9JLG8 1095 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Col5a2Q3U962 1497 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Fam171a1A2ATK9 892 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Epha3P29319 983 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Etv6P97360 485 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 EsrrbQ61539 433 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Zbtb7bQ64321 544 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Mboat7Q8CHK3 473 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Epn2Q8CHU3 595 aa17.73■□□□□ 0.43
Trim8-201ENSMUST00000026008 Gm382B1AXN3 1250 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Serpina1bP22599 413 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Ercc5P35689 1170 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Efcab14Q8BGQ6 484 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Appl2Q8K3G9 662 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Mageb16Q9CWV4 363 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Cfap57Q9D180 1249 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Pabpc6Q9D4E6 643 aaKnown RBP17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Sema3eP70275 775 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Prr7Q3V0I2 269 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Gas7Q60780 421 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 OtoaQ8K561 1137 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Lman1Q9D0F3 517 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Irx5Q9JKQ4 484 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Edf1Q9JMG1 148 aaKnown RBP17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Cyp2ab1S4R196 498 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Cul4aQ3TCH7 759 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Ttf2Q5NC05 1138 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Dlg4Q62108 724 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Sh3d21Q7TSG5 549 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Scfd2Q8BTY8 684 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Slc14a1Q8VHL0 384 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Cmtm5Q9D6G9 156 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 Styxl1Q9DAR2 321 aa17.72■□□□□ 0.43
Trim8-201ENSMUST00000026008 FosP01101 380 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Tagap1P0CAX8 505 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Ccdc33Q3ULW6 985 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Fgfr1opQ66JX5 399 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Ppp2r2aQ6P1F6 447 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Bank1Q80VH0 783 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Depdc1bQ8BH88 529 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Ccdc186Q8C9S4 917 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Slc25a38Q91XD8 326 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Got1P05201 413 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Mgat1P27808 447 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Q3TTJ4 293 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Znf354cQ571J5 560 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 TwistnbQ78WZ7 330 aaKnown RBP17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Pja2Q80U04 707 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Cyp26b1Q811W2 512 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 DcakdQ8BHC4 231 aaKnown RBP17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Trex1Q91XB0 314 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Znf354bQ9QXT9 601 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Entpd5Q9WUZ9 427 aa17.71■□□□□ 0.43
Trim8-201ENSMUST00000026008 Gm3127E9Q9P5 263 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Usp17ldG5E8G2 545 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Usp17lcG5E8I7 545 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Gm3453K7N724 263 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Rnaseh1O70338 285 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Tas2r134Q7TQB0 298 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Nucks1Q80XU3 234 aaKnown RBP17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Ergic2Q9CR89 377 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Krt71Q9R0H5 524 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Cpb1B2RS76 415 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Cd68P31996 326 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Flt3Q00342 1000 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Fgfr4Q03142 799 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Ogfod1Q3U0K8 545 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Mier3Q3UHF3 551 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Kif5bQ61768 963 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 AsphQ8BSY0 741 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Tbc1d10cQ8C9V1 444 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Pcdhgb4Q91XX6 912 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Lrrc38A2VDH3 298 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Ace3D0G895 737 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Gm8994E9PV04 411 aaKnown RBP17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Ssxb10Q6XAR7 170 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Zic5Q7TQ40 622 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Gpr101Q80T62 511 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Slc12a6Q924N4 1150 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Rasgef1cQ9D300 466 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Q9DAQ4 598 aa17.7■□□□□ 0.42
Trim8-201ENSMUST00000026008 Tex13c2A0A0G2JGA3 530 aa17.69■□□□□ 0.42
Trim8-201ENSMUST00000026008 Stk10O55098 966 aa17.69■□□□□ 0.42
Trim8-201ENSMUST00000026008 ArP19091 899 aa17.69■□□□□ 0.42
Trim8-201ENSMUST00000026008 Lig3P97386 1015 aa17.69■□□□□ 0.42
Trim8-201ENSMUST00000026008 Peg10Q7TN75 958 aaKnown RBP17.69■□□□□ 0.42
Trim8-201ENSMUST00000026008 3830417A13RikQ8BQJ2 303 aa17.69■□□□□ 0.42
Trim8-201ENSMUST00000026008 Gramd4Q8CB44 633 aa17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms