RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Cul1Q9WTX6 776 aa16.33■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Cntnap2Q9CPW0 1332 aa16.33■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 C2cd2E9Q3C1 696 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 MyocO70624 490 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 CtshP49935 333 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 ItgaeQ60677 1167 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 DcakdQ8BHC4 231 aaKnown RBP16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Fam228aQ8CDW1 299 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Col23a1Q8K4G2 532 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Dr1Q91WV0 176 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Snx10Q9CWT3 201 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Rasgef1cQ9D300 466 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Fam187aQ9D3R5 417 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Scgb2b7D3YYY1 112 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 GcP21614 476 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Hdgfl1Q2VPR5 283 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Dlg4Q62108 724 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Sp4Q62445 782 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Tspyl5Q69ZB3 406 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Cypt2Q6P924 180 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 AdalQ80SY6 360 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Msantd4Q91YU3 345 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Spdl1Q923A2 608 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Trap1Q9CQN1 706 aaKnown RBP16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Fam205a1D3YZF6 1314 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Gm14525B1AZA0 212 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Gm2012B1B0R1 212 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 1700018F24RikB2RW27 314 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Gm2030D3Z7C4 212 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Slc16a2O70324 545 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Cyp11b2P15539 500 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Myo1fP70248 1099 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Frmd8Q3UFK8 466 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Gm14819Q62478 212 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Nr2e1Q64104 385 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Ppp2r5aQ6PD03 486 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Slc17a8Q8BFU8 601 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Rabl3Q9D4V7 236 aa16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Nup50Q9JIH2 466 aaKnown RBP16.32■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Cyth3O08967 399 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Rnaseh2bQ80ZV0 308 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Btnl9Q8BJE2 536 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Ttc5Q99LG4 440 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Cfap57Q9D180 1249 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 SetQ9EQU5 289 aaKnown RBP16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 IvdQ9JHI5 424 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Frmpd3A0A140LIW3 1774 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Osbpl7A2A716 963 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Magea4F2Z493 315 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 P4ha1Q60715 534 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Sh3d21Q7TSG5 549 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Pja2Q80U04 707 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Tmem39bQ810L4 492 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Eif3hQ91WK2 352 aaKnown RBP16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 ArpinQ9D0A3 226 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Nfu1Q9QZ23 255 aa16.31■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Scn3aA2ASI5 1947 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Skor2A7M7C7 1008 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Cpb1B2RS76 415 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Heatr4E9Q357 955 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Gm6121L7MUF1 212 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Serpinb8O08800 374 aaKnown RBP16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Gdap1O88741 358 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Pbxip1Q3TVI8 727 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Tfe3Q64092 572 aaKnown RBP16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Zdhhc24Q6IR37 284 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Ints2Q80UK8 1198 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 NrcamQ810U4 1256 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Gprasp2Q8BUY8 826 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 OtoaQ8K561 1137 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 3830403N18RikQ9D6C3 208 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Znf354bQ9QXT9 601 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Ctnna1P26231 906 aaKnown RBP16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 RelaQ04207 549 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Prom2Q3UUY6 835 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Kctd19Q562E2 927 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Nucks1Q80XU3 234 aaKnown RBP16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Mettl16Q9CQG2 553 aaKnown RBP16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Ndufab1Q9CR21 156 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Cfap53Q9D439 514 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 MefvQ9JJ26 767 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Txnrd2Q9JLT4 524 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Prss51A0A286YDY8 319 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Fbf1A2A870 1173 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Q3TTJ4 293 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Sorbs1Q62417 1290 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Msantd2Q6NZR2 559 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 PpatQ8CIH9 517 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Kcnh7Q9ER47 1195 aa16.3■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Slc35g2D3YVE8 412 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Zmym1Q3TJB1 983 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 CbarpQ66L44 698 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Pdzph1Q8BGR1 1238 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Depdc1bQ8BH88 529 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Lmo3Q8BZL8 145 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Rapgef5Q8C0Q9 814 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Epn2Q8CHU3 595 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Aipl1Q924K1 328 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Psme4Q5SSW2 1843 aa16.29■□□□□ 0.2
Nkx3-1-201ENSMUST00000022646 Smchd1Q6P5D8 2007 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms