RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	YOL029C	Q08187	201 aa		1.44	□□□□□ -2.18
LEE1	YPL054W	VPS54	Q12071	889 aa		1.44	□□□□□ -2.18
LEE1	YPL054W	YDL109C	Q12103	647 aa		1.44	□□□□□ -2.18
LEE1	YPL054W	YDL211C	Q12121	372 aa		1.44	□□□□□ -2.18
LEE1	YPL054W	RPL12A	P0CX53	165 aa	Known RBP	1.43	□□□□□ -2.18
LEE1	YPL054W	RPL12B	P0CX54	165 aa		1.43	□□□□□ -2.18
LEE1	YPL054W	YPS1	P32329	569 aa		1.43	□□□□□ -2.18
LEE1	YPL054W	RIM1	P32445	135 aa	Known RBP	1.43	□□□□□ -2.18
LEE1	YPL054W	SLM4	P38247	162 aa		1.43	□□□□□ -2.18
LEE1	YPL054W	YGL088W	P53151	121 aa		1.43	□□□□□ -2.18
LEE1	YPL054W	PRM1	P53835	661 aa		1.43	□□□□□ -2.18
LEE1	YPL054W	AEP3	Q12089	606 aa		1.43	□□□□□ -2.18
LEE1	YPL054W	RNH203	Q12338	110 aa		1.43	□□□□□ -2.18
LEE1	YPL054W	PGA3	Q12746	312 aa	Known RBP	1.43	□□□□□ -2.18
LEE1	YPL054W	MKK1	P32490	508 aa		1.42	□□□□□ -2.18
LEE1	YPL054W	ZTA1	P38230	334 aa	Known RBP	1.42	□□□□□ -2.18
LEE1	YPL054W	ECM14	P38836	430 aa		1.42	□□□□□ -2.18
LEE1	YPL054W	ABM1	P47146	123 aa		1.42	□□□□□ -2.18
LEE1	YPL054W	RGM1	Q00453	211 aa		1.42	□□□□□ -2.18
LEE1	YPL054W	ERO1	Q03103	563 aa		1.42	□□□□□ -2.18
LEE1	YPL054W	GMC1	Q04399	608 aa		1.42	□□□□□ -2.18
LEE1	YPL054W	YDR341C	Q05506	607 aa	Known RBP	1.42	□□□□□ -2.18
LEE1	YPL054W	OPI3	P05375	206 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	RPL23A	P0CX41	137 aa	Known RBP	1.41	□□□□□ -2.18
LEE1	YPL054W	RPL23B	P0CX42	137 aa	Known RBP	1.41	□□□□□ -2.18
LEE1	YPL054W	HPR1	P17629	752 aa	Known RBP	1.41	□□□□□ -2.18
LEE1	YPL054W	CPT1	P17898	393 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	SNF6	P18888	332 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	COX10	P21592	462 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	MIR1	P23641	311 aa	Known RBP	1.41	□□□□□ -2.18
LEE1	YPL054W	MIG1	P27705	504 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	TOA2	P32774	122 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	GPD2	P41911	440 aa	Known RBP	1.41	□□□□□ -2.18
LEE1	YPL054W	AIM23	P47015	356 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	SMD1	Q02260	146 aa	Predicted RBP	1.41	□□□□□ -2.18
LEE1	YPL054W	FRE8	Q12209	686 aa		1.41	□□□□□ -2.18
LEE1	YPL054W	TIP20	P33891	701 aa		1.4	□□□□□ -2.19
LEE1	YPL054W	NAS6	P50086	228 aa		1.4	□□□□□ -2.19
LEE1	YPL054W	MIX17	Q03667	156 aa		1.4	□□□□□ -2.19
LEE1	YPL054W	SAG1	P20840	650 aa		1.39	□□□□□ -2.19
LEE1	YPL054W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	1.39	□□□□□ -2.19	not detected
LEE1	YPL054W	NFU1	P32860	256 aa		1.39	□□□□□ -2.19
LEE1	YPL054W	YKR032W	P36127	104 aa		1.39	□□□□□ -2.19
LEE1	YPL054W	YMR262W	P38430	313 aa		1.39	□□□□□ -2.19
LEE1	YPL054W	BNI5	P53890	448 aa	Known RBP	1.39	□□□□□ -2.19
LEE1	YPL054W	URC2	Q04411	772 aa		1.39	□□□□□ -2.19
LEE1	YPL054W	CDD1	Q06549	142 aa		1.39	□□□□□ -2.19
LEE1	YPL054W	TSR2	Q06672	205 aa	Known RBP	1.39	□□□□□ -2.19
LEE1	YPL054W	BGL2	P15703	313 aa	Known RBP	1.38	□□□□□ -2.19
LEE1	YPL054W	BYE1	P36106	594 aa		1.38	□□□□□ -2.19
LEE1	YPL054W	QDR3	P38227	689 aa		1.38	□□□□□ -2.19
LEE1	YPL054W	SER3	P40054	469 aa		1.38	□□□□□ -2.19
LEE1	YPL054W	PAC11	P40960	533 aa		1.38	□□□□□ -2.19
LEE1	YPL054W	HSH155	P49955	971 aa	Known RBP	1.38	□□□□□ -2.19
LEE1	YPL054W	PMT5	P52867	743 aa		1.38	□□□□□ -2.19
LEE1	YPL054W	NBP1	P52919	319 aa	Predicted RBP	1.38	□□□□□ -2.19
LEE1	YPL054W	YPL113C	Q02961	396 aa		1.38	□□□□□ -2.19
LEE1	YPL054W	YLR287C	Q05881	355 aa		1.38	□□□□□ -2.19
LEE1	YPL054W	RLP24	Q07915	199 aa	Known RBP	1.38	□□□□□ -2.19
LEE1	YPL054W	URA7	P28274	579 aa	Known RBP	1.37	□□□□□ -2.19
LEE1	YPL054W	PMT2	P31382	759 aa		1.37	□□□□□ -2.19
LEE1	YPL054W	EFM1	P38732	585 aa		1.37	□□□□□ -2.19
LEE1	YPL054W	BUD13	P46947	266 aa	Predicted RBP	1.37	□□□□□ -2.19
LEE1	YPL054W	SHE4	P51534	789 aa		1.37	□□□□□ -2.19
LEE1	YPL054W	UTP15	Q04305	513 aa	Known RBP	1.37	□□□□□ -2.19
LEE1	YPL054W	PRP46	Q12417	451 aa	Predicted RBP	1.37	□□□□□ -2.19
LEE1	YPL054W	PHO91	P27514	894 aa		1.36	□□□□□ -2.19
LEE1	YPL054W	YKR015C	P36111	568 aa		1.36	□□□□□ -2.19
LEE1	YPL054W	YBL081W	P38180	368 aa	Known RBP	1.36	□□□□□ -2.19
LEE1	YPL054W	ASG7	P46993	209 aa		1.36	□□□□□ -2.19
LEE1	YPL054W	YLR456W	Q06199	204 aa		1.36	□□□□□ -2.19
LEE1	YPL054W	MMT2	Q08970	484 aa		1.36	□□□□□ -2.19
LEE1	YPL054W	YPR063C	Q12160	140 aa		1.36	□□□□□ -2.19
LEE1	YPL054W	RNA1	P11745	407 aa	Known RBP	1.35	□□□□□ -2.19
LEE1	YPL054W	ERV1	P27882	189 aa		1.35	□□□□□ -2.19
LEE1	YPL054W	NDE1	P40215	560 aa		1.35	□□□□□ -2.19
LEE1	YPL054W	MNN5	P46982	586 aa		1.35	□□□□□ -2.19
LEE1	YPL054W	ROG1	P53118	685 aa		1.35	□□□□□ -2.19
LEE1	YPL054W	CLP1	Q08685	445 aa	Predicted RBP	1.35	□□□□□ -2.19
LEE1	YPL054W	MRPL8	P22353	238 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	SSE1	P32589	693 aa	Known RBP	1.34	□□□□□ -2.19
LEE1	YPL054W	YSC83	P32792	385 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	FAD1	P38913	306 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	EFM3	P47163	339 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	RTT102	P53330	157 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	CSI1	Q04368	295 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	ARR1	Q06596	294 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	GAT3	Q07928	141 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	AAD15	Q08361	143 aa		1.34	□□□□□ -2.19
LEE1	YPL054W	PDE2	P06776	526 aa		1.33	□□□□□ -2.2
LEE1	YPL054W	MET2	P08465	486 aa		1.33	□□□□□ -2.2
LEE1	YPL054W	CPR2	P23285	205 aa		1.33	□□□□□ -2.2
LEE1	YPL054W	RRP7	P25368	297 aa	Predicted RBP	1.33	□□□□□ -2.2
LEE1	YPL054W	ADK2	P26364	225 aa		1.33	□□□□□ -2.2
LEE1	YPL054W	LSM5	P40089	93 aa	Known RBP	1.33	□□□□□ -2.2
LEE1	YPL054W	YDR114C	Q04597	100 aa		1.33	□□□□□ -2.2
LEE1	YPL054W	YDL121C	Q07541	149 aa		1.33	□□□□□ -2.2
LEE1	YPL054W	SCM3	Q12334	223 aa		1.33	□□□□□ -2.2
LEE1	YPL054W	SMC2	P38989	1170 aa	Known RBP	1.32	□□□□□ -2.2
LEE1	YPL054W	MOB2	P43563	287 aa		1.32	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms