RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W NAS6P50086 228 aa0.81□□□□□ -2.28
SGF11YPL047W PMT5P52867 743 aa0.81□□□□□ -2.28
SGF11YPL047W PRM1P53835 661 aa0.81□□□□□ -2.28
SGF11YPL047W YMR155WQ03795 547 aa0.81□□□□□ -2.28
SGF11YPL047W YDR131CQ03899 556 aa0.81□□□□□ -2.28
SGF11YPL047W GMC1Q04399 608 aa0.81□□□□□ -2.28
SGF11YPL047W YLR456WQ06199 204 aa0.81□□□□□ -2.28
SGF11YPL047W DIB1Q06819 143 aaPredicted RBP0.81□□□□□ -2.28
SGF11YPL047W ASA1Q06822 443 aa0.81□□□□□ -2.28
SGF11YPL047W AEP3Q12089 606 aa0.81□□□□□ -2.28
SGF11YPL047W YDL109CQ12103 647 aa0.81□□□□□ -2.28
SGF11YPL047W YAL067W-AQ8TGK6 75 aa0.81□□□□□ -2.28
SGF11YPL047W RPL23AP0CX41 137 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W RPL23BP0CX42 137 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W RNA1P11745 407 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W CUP2P15315 225 aa0.8□□□□□ -2.28
SGF11YPL047W MIR1P23641 311 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W RPL16AP26784 199 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W RIM1P32445 135 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W NRP1P32770 719 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
SGF11YPL047W ALK2P32789 676 aaPredicted RBP0.8□□□□□ -2.28
SGF11YPL047W TKL2P33315 681 aa0.8□□□□□ -2.28
SGF11YPL047W BYE1P36106 594 aa0.8□□□□□ -2.28
SGF11YPL047W YBR241CP38142 488 aa0.8□□□□□ -2.28
SGF11YPL047W QDR3P38227 689 aa0.8□□□□□ -2.28
SGF11YPL047W ATG12P38316 186 aa0.8□□□□□ -2.28
SGF11YPL047W WSC4P38739 605 aa0.8□□□□□ -2.28
SGF11YPL047W GGC1P38988 300 aa0.8□□□□□ -2.28
SGF11YPL047W NDE1P40215 560 aa0.8□□□□□ -2.28
SGF11YPL047W YIL059CP40520 121 aa0.8□□□□□ -2.28
SGF11YPL047W GPD2P41911 440 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W SRB7P47822 140 aa0.8□□□□□ -2.28
SGF11YPL047W HSH155P49955 971 aaKnown RBP0.8□□□□□ -2.28
SGF11YPL047W RTT102P53330 157 aa0.8□□□□□ -2.28
SGF11YPL047W SMD1Q02260 146 aaPredicted RBP0.8□□□□□ -2.28
SGF11YPL047W MRX11Q03079 207 aa0.8□□□□□ -2.28
SGF11YPL047W VPS72Q03388 795 aa0.8□□□□□ -2.28
SGF11YPL047W YMR010WQ03687 405 aa0.8□□□□□ -2.28
SGF11YPL047W API2Q04413 109 aa0.8□□□□□ -2.28
SGF11YPL047W AAD15Q08361 143 aa0.8□□□□□ -2.28
SGF11YPL047W UAF30Q08747 228 aa0.8□□□□□ -2.28
SGF11YPL047W COX10P21592 462 aa0.79□□□□□ -2.28
SGF11YPL047W MRPL8P22353 238 aa0.79□□□□□ -2.28
SGF11YPL047W SLM5P25345 492 aaKnown RBP0.79□□□□□ -2.28
SGF11YPL047W ECM14P38836 430 aa0.79□□□□□ -2.28
SGF11YPL047W AIM23P47015 356 aa0.79□□□□□ -2.28
SGF11YPL047W YJR030CP47101 745 aa0.79□□□□□ -2.28
SGF11YPL047W TCB2P48231 1178 aa0.79□□□□□ -2.28
SGF11YPL047W ROG1P53118 685 aa0.79□□□□□ -2.28
SGF11YPL047W PIB2P53191 635 aa0.79□□□□□ -2.28
SGF11YPL047W NRM1P53718 249 aa0.79□□□□□ -2.28
SGF11YPL047W SLT2Q00772 484 aa0.79□□□□□ -2.28
SGF11YPL047W MDM1Q01846 1127 aa0.79□□□□□ -2.28
SGF11YPL047W YDR541CQ03049 344 aa0.79□□□□□ -2.28
SGF11YPL047W VPS54Q12071 889 aa0.79□□□□□ -2.28
SGF11YPL047W TDH2P00358 332 aaKnown RBP0.78□□□□□ -2.28
SGF11YPL047W TDH3P00359 332 aaKnown RBP RIP-Chip data0.78□□□□□ -2.28 RIP-Chip
SGF11YPL047W OPI3P05375 206 aa0.78□□□□□ -2.28
SGF11YPL047W RPS23AP0CX29 145 aaKnown RBP0.78□□□□□ -2.28
SGF11YPL047W RPS23BP0CX30 145 aa0.78□□□□□ -2.28
SGF11YPL047W HPR1P17629 752 aaKnown RBP0.78□□□□□ -2.28
SGF11YPL047W ERV1P27882 189 aa0.78□□□□□ -2.28
SGF11YPL047W LTV1P34078 463 aa0.78□□□□□ -2.28
SGF11YPL047W YPT35P38815 214 aaKnown RBP0.78□□□□□ -2.28
SGF11YPL047W BDH1P39714 382 aa0.78□□□□□ -2.28
SGF11YPL047W YGL088WP53151 121 aa0.78□□□□□ -2.28
SGF11YPL047W YGR111WP53265 400 aa0.78□□□□□ -2.28
SGF11YPL047W ERO1Q03103 563 aa0.78□□□□□ -2.28
SGF11YPL047W SCS7Q03529 384 aa0.78□□□□□ -2.28
SGF11YPL047W ERB1Q04660 807 aaKnown RBP0.78□□□□□ -2.28
SGF11YPL047W GAT3Q07928 141 aa0.78□□□□□ -2.28
SGF11YPL047W ALE1Q08548 619 aa0.78□□□□□ -2.28
SGF11YPL047W RPN8Q08723 338 aaKnown RBP0.78□□□□□ -2.28
SGF11YPL047W YDR018CQ12185 396 aa0.78□□□□□ -2.28
SGF11YPL047W PRP46Q12417 451 aaPredicted RBP0.78□□□□□ -2.28
SGF11YPL047W PDX1P16451 410 aa0.77□□□□□ -2.29
SGF11YPL047W CPT1P17898 393 aa0.77□□□□□ -2.29
SGF11YPL047W PHO91P27514 894 aa0.77□□□□□ -2.29
SGF11YPL047W PMT2P31382 759 aa0.77□□□□□ -2.29
SGF11YPL047W MKK1P32490 508 aa0.77□□□□□ -2.29
SGF11YPL047W YSC83P32792 385 aa0.77□□□□□ -2.29
SGF11YPL047W MED8P38304 223 aa0.77□□□□□ -2.29
SGF11YPL047W RRG9P40156 214 aa0.77□□□□□ -2.29
SGF11YPL047W MIC19P43594 170 aa0.77□□□□□ -2.29
SGF11YPL047W CDH1P53197 566 aa0.77□□□□□ -2.29
SGF11YPL047W SUR7P54003 302 aa0.77□□□□□ -2.29
SGF11YPL047W YPL113CQ02961 396 aa0.77□□□□□ -2.29
SGF11YPL047W GAS2Q06135 555 aa0.77□□□□□ -2.29
SGF11YPL047W YOL029CQ08187 201 aa0.77□□□□□ -2.29
SGF11YPL047W SLM3Q12093 417 aa0.77□□□□□ -2.29
SGF11YPL047W SGT2Q12118 346 aaKnown RBP0.77□□□□□ -2.29
SGF11YPL047W YDL211CQ12121 372 aa0.77□□□□□ -2.29
SGF11YPL047W FRE8Q12209 686 aa0.77□□□□□ -2.29
SGF11YPL047W BGL2P15703 313 aaKnown RBP0.76□□□□□ -2.29
SGF11YPL047W MDH1P17505 334 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
SGF11YPL047W PHO84P25297 587 aaKnown RBP0.76□□□□□ -2.29
SGF11YPL047W RPC53P25441 422 aa0.76□□□□□ -2.29
SGF11YPL047W INO2P26798 304 aa0.76□□□□□ -2.29
SGF11YPL047W MIG1P27705 504 aa0.76□□□□□ -2.29
SGF11YPL047W EFB1P32471 206 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms