RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YKE4P40544 346 aa9.03□□□□□ -0.96
SSN3YPL042C DIA3P52290 468 aa9.03□□□□□ -0.96
SSN3YPL042C IMA1P53051 589 aa9.03□□□□□ -0.96
SSN3YPL042C TNA1P53322 534 aa9.03□□□□□ -0.96
SSN3YPL042C HST3P53687 447 aa9.03□□□□□ -0.96
SSN3YPL042C ECM9Q02202 377 aa9.03□□□□□ -0.96
SSN3YPL042C FIN1Q03898 291 aa9.03□□□□□ -0.96
SSN3YPL042C YPR127WQ06494 345 aa9.03□□□□□ -0.96
SSN3YPL042C GPN3Q06543 272 aa9.03□□□□□ -0.96
SSN3YPL042C ATG10Q07879 167 aa9.03□□□□□ -0.96
SSN3YPL042C IES3Q12345 250 aa9.03□□□□□ -0.96
SSN3YPL042C PST1Q12355 444 aa9.03□□□□□ -0.96
SSN3YPL042C IPP1P00817 287 aaKnown RBP9.02□□□□□ -0.97
SSN3YPL042C RPL6BP05739 176 aaKnown RBP9.02□□□□□ -0.97
SSN3YPL042C YKR104WP0CE69 306 aa9.02□□□□□ -0.97
SSN3YPL042C SIS1P25294 352 aaKnown RBP9.02□□□□□ -0.97
SSN3YPL042C CIN8P27895 1000 aa9.02□□□□□ -0.97
SSN3YPL042C SDH3P33421 198 aa9.02□□□□□ -0.97
SSN3YPL042C SPT23P35210 1082 aa9.02□□□□□ -0.97
SSN3YPL042C YJR141WP47172 347 aaPredicted RBP9.02□□□□□ -0.97
SSN3YPL042C NAS6P50086 228 aa9.02□□□□□ -0.97
SSN3YPL042C PKP2P53170 491 aa9.02□□□□□ -0.97
SSN3YPL042C RPL6AQ02326 176 aaKnown RBP9.02□□□□□ -0.97
SSN3YPL042C YMR010WQ03687 405 aa9.02□□□□□ -0.97
SSN3YPL042C ACL4Q03771 387 aa9.02□□□□□ -0.97
SSN3YPL042C EMI1Q04406 187 aa9.02□□□□□ -0.97
SSN3YPL042C BSC6Q08280 497 aa9.02□□□□□ -0.97
SSN3YPL042C UAF30Q08747 228 aa9.02□□□□□ -0.97
SSN3YPL042C CSM4Q08955 156 aa9.02□□□□□ -0.97
SSN3YPL042C Q0182Q9ZZW1 134 aa9.02□□□□□ -0.97
SSN3YPL042C ATP6P00854 259 aa9.01□□□□□ -0.97
SSN3YPL042C PDC5P16467 563 aaKnown RBP9.01□□□□□ -0.97
SSN3YPL042C YSR3P23501 404 aa9.01□□□□□ -0.97
SSN3YPL042C NFS1P25374 497 aa9.01□□□□□ -0.97
SSN3YPL042C YCR061WP25639 631 aa9.01□□□□□ -0.97
SSN3YPL042C FRE2P36033 711 aa9.01□□□□□ -0.97
SSN3YPL042C YKL071WP36086 256 aa9.01□□□□□ -0.97
SSN3YPL042C GLY1P37303 387 aaKnown RBP9.01□□□□□ -0.97
SSN3YPL042C SBE22P38814 852 aa9.01□□□□□ -0.97
SSN3YPL042C UME6P39001 836 aa9.01□□□□□ -0.97
SSN3YPL042C YPT32P51996 222 aaKnown RBP9.01□□□□□ -0.97
SSN3YPL042C BUD17P53727 317 aa9.01□□□□□ -0.97
SSN3YPL042C ZRG17P53735 605 aa9.01□□□□□ -0.97
SSN3YPL042C CWC25P53854 179 aaKnown RBP9.01□□□□□ -0.97
SSN3YPL042C SKI8Q02793 397 aaPredicted RBP9.01□□□□□ -0.97
SSN3YPL042C RAD34Q06665 692 aa9.01□□□□□ -0.97
SSN3YPL042C MFG1Q07684 458 aa9.01□□□□□ -0.97
SSN3YPL042C PBN1P25580 416 aa9□□□□□ -0.97
SSN3YPL042C IDH1P28834 360 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SSN3YPL042C AAR2P32357 355 aaPredicted RBP9□□□□□ -0.97
SSN3YPL042C YKL151CP36059 337 aa9□□□□□ -0.97
SSN3YPL042C SOL2P37262 315 aa9□□□□□ -0.97
SSN3YPL042C GRE3P38715 327 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SSN3YPL042C CCT6P39079 546 aa9□□□□□ -0.97
SSN3YPL042C VNX1P42839 908 aa9□□□□□ -0.97
SSN3YPL042C PRM10P42946 383 aa9□□□□□ -0.97
SSN3YPL042C IMD3P50095 523 aaKnown RBP9□□□□□ -0.97
SSN3YPL042C YGR066CP53242 292 aa9□□□□□ -0.97
SSN3YPL042C YSA1Q01976 231 aa9□□□□□ -0.97
SSN3YPL042C YKR005CQ02203 525 aa9□□□□□ -0.97
SSN3YPL042C NUP116Q02630 1113 aa9□□□□□ -0.97
SSN3YPL042C GIS1Q03833 894 aa9□□□□□ -0.97
SSN3YPL042C MHR1Q06630 226 aa9□□□□□ -0.97
SSN3YPL042C SUL2Q12325 893 aa9□□□□□ -0.97
SSN3YPL042C NHP6BP11633 99 aaKnown RBP9□□□□□ -0.97
SSN3YPL042C CBS2P14905 389 aa9□□□□□ -0.97
SSN3YPL042C RNA15P25299 296 aaPredicted RBP9□□□□□ -0.97
SSN3YPL042C STE14P32584 239 aa9□□□□□ -0.97
SSN3YPL042C VAM7P32912 316 aa9□□□□□ -0.97
SSN3YPL042C SCO2P38072 301 aa9□□□□□ -0.97
SSN3YPL042C HRB1P38922 454 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SSN3YPL042C FET3P38993 636 aa9□□□□□ -0.97
SSN3YPL042C VRG4P40107 337 aa9□□□□□ -0.97
SSN3YPL042C MTR3P48240 250 aaPredicted RBP9□□□□□ -0.97
SSN3YPL042C YMR226CQ05016 267 aaKnown RBP9□□□□□ -0.97
SSN3YPL042C XYL2Q07993 356 aa9□□□□□ -0.97
SSN3YPL042C SGT1Q08446 395 aa9□□□□□ -0.97
SSN3YPL042C NSL1Q12143 216 aa9□□□□□ -0.97
SSN3YPL042C RRP42Q12277 265 aaPredicted RBP9□□□□□ -0.97
SSN3YPL042C SNU23Q12368 194 aaPredicted RBP9□□□□□ -0.97
SSN3YPL042C TFB5Q3E7C1 72 aaPredicted RBP9□□□□□ -0.97
SSN3YPL042C ATP2P00830 511 aaKnown RBP8.99□□□□□ -0.97
SSN3YPL042C NFT1P0CE68 1218 aa8.99□□□□□ -0.97
SSN3YPL042C ZRC1P20107 442 aa8.99□□□□□ -0.97
SSN3YPL042C FAA1P30624 700 aaKnown RBP8.99□□□□□ -0.97
SSN3YPL042C PRP21P32524 280 aaPredicted RBP8.99□□□□□ -0.97
SSN3YPL042C ISC10P32645 267 aa8.99□□□□□ -0.97
SSN3YPL042C MNS1P32906 549 aa8.99□□□□□ -0.97
SSN3YPL042C HES1P35843 434 aa8.99□□□□□ -0.97
SSN3YPL042C GIP1P38229 639 aa8.99□□□□□ -0.97
SSN3YPL042C MAM33P40513 266 aa8.99□□□□□ -0.97
SSN3YPL042C YGL176CP46945 554 aa8.99□□□□□ -0.97
SSN3YPL042C HIT1P46973 164 aa8.99□□□□□ -0.97
SSN3YPL042C EFM3P47163 339 aa8.99□□□□□ -0.97
SSN3YPL042C YGR015CP53208 328 aa8.99□□□□□ -0.97
SSN3YPL042C SWP1Q02795 286 aa8.99□□□□□ -0.97
SSN3YPL042C YPL080CQ02826 108 aa8.99□□□□□ -0.97
SSN3YPL042C HPF1Q05164 967 aa8.99□□□□□ -0.97
SSN3YPL042C RDR1Q08904 546 aa8.99□□□□□ -0.97
SSN3YPL042C SAM4Q08985 325 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms