RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	ABZ2	Q03266	374 aa		4.18	□□□□□ -1.74
NFI1	YOR156C	MCT1	Q12283	360 aa		4.18	□□□□□ -1.74
NFI1	YOR156C	RTC2	P38279	296 aa		4.17	□□□□□ -1.74
NFI1	YOR156C	SHY1	P53266	389 aa		4.17	□□□□□ -1.74
NFI1	YOR156C	APC5	Q08683	685 aa		4.17	□□□□□ -1.74
NFI1	YOR156C	YLL053C	P0CD98	152 aa		4.17	□□□□□ -1.74
NFI1	YOR156C	RPS18A	P0CX55	146 aa	Known RBP	4.17	□□□□□ -1.74
NFI1	YOR156C	RPS18B	P0CX56	146 aa	Predicted RBP	4.17	□□□□□ -1.74
NFI1	YOR156C	ARF2	P19146	181 aa	Known RBP	4.17	□□□□□ -1.74
NFI1	YOR156C	BAT1	P38891	393 aa	Known RBP	4.17	□□□□□ -1.74
NFI1	YOR156C	MIG3	P39943	394 aa		4.17	□□□□□ -1.74
NFI1	YOR156C	UTP18	P40362	594 aa	Predicted RBP	4.17	□□□□□ -1.74
NFI1	YOR156C	YNL146W	P53906	100 aa		4.17	□□□□□ -1.74
NFI1	YOR156C	YDR262W	Q12331	272 aa		4.17	□□□□□ -1.74
NFI1	YOR156C	WTM1	Q12363	437 aa	Known RBP	4.17	□□□□□ -1.74
NFI1	YOR156C	RAD1	P06777	1100 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	RNR2	P09938	399 aa	Known RBP	4.16	□□□□□ -1.74
NFI1	YOR156C	RPL16A	P26784	199 aa	Known RBP	4.16	□□□□□ -1.74
NFI1	YOR156C	PRR1	P28708	518 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	YEL045C	P32616	141 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	TOA1	P32773	286 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	PEX32	P38292	413 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	RRF1	P38771	230 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	NAG1	Q8TGN9	163 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	CIN8	P27895	1000 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	MKK1	P32490	508 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	YHR182W	P38870	785 aa		4.16	□□□□□ -1.74
NFI1	YOR156C	YNL208W	P40159	199 aa	Known RBP	4.16	□□□□□ -1.74
NFI1	YOR156C	REX2	P54964	269 aa	Known RBP	4.16	□□□□□ -1.74
NFI1	YOR156C	HEM4	P06174	275 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	YKR015C	P36111	568 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	RBG1	P39729	369 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	SSO2	P39926	295 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	OXA1	P39952	402 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	HEM14	P40012	539 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	GAB1	P41733	394 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	YCH1	P42937	148 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	SDT1	P53078	280 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	CSM3	Q04659	317 aa		4.15	□□□□□ -1.75
NFI1	YOR156C	AAT2	P23542	418 aa	Known RBP	4.14	□□□□□ -1.75
NFI1	YOR156C	NUP2	P32499	720 aa		4.14	□□□□□ -1.75
NFI1	YOR156C	YPT35	P38815	214 aa	Known RBP	4.14	□□□□□ -1.75
NFI1	YOR156C	YER186C	P40101	306 aa		4.14	□□□□□ -1.75
NFI1	YOR156C	AIM20	P40451	204 aa		4.14	□□□□□ -1.75
NFI1	YOR156C	YJR030C	P47101	745 aa		4.14	□□□□□ -1.75
NFI1	YOR156C	YET2	Q04210	160 aa		4.14	□□□□□ -1.75
NFI1	YOR156C	MDY2	Q12285	212 aa		4.14	□□□□□ -1.75
NFI1	YOR156C	YOX1	P34161	385 aa		4.14	□□□□□ -1.75
NFI1	YOR156C	PRE5	P40302	234 aa	Known RBP	4.14	□□□□□ -1.75
NFI1	YOR156C	SKI8	Q02793	397 aa	Predicted RBP	4.14	□□□□□ -1.75
NFI1	YOR156C	VPS63	O13549	108 aa		4.13	□□□□□ -1.75
NFI1	YOR156C	CDC37	P06101	506 aa	Known RBP	4.13	□□□□□ -1.75
NFI1	YOR156C	RPL23A	P0CX41	137 aa	Known RBP	4.13	□□□□□ -1.75
NFI1	YOR156C	RPL23B	P0CX42	137 aa	Known RBP	4.13	□□□□□ -1.75
NFI1	YOR156C	IML3	P38265	245 aa		4.13	□□□□□ -1.75
NFI1	YOR156C	LSM12	P38828	187 aa	Known RBP	4.13	□□□□□ -1.75
NFI1	YOR156C	TMC1	Q08422	150 aa	Predicted RBP	4.13	□□□□□ -1.75
NFI1	YOR156C	SLM3	Q12093	417 aa		4.13	□□□□□ -1.75
NFI1	YOR156C	CBP2	P03874	630 aa	Predicted RBP	4.13	□□□□□ -1.75
NFI1	YOR156C	MYO3	P36006	1272 aa		4.13	□□□□□ -1.75
NFI1	YOR156C	BTT1	P40314	149 aa	Predicted RBP	4.13	□□□□□ -1.75
NFI1	YOR156C	NAS6	P50086	228 aa		4.13	□□□□□ -1.75
NFI1	YOR156C	MHR1	Q06630	226 aa		4.13	□□□□□ -1.75
NFI1	YOR156C	YDL109C	Q12103	647 aa		4.13	□□□□□ -1.75
NFI1	YOR156C	PET18	P25362	215 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	SPR1	P32603	445 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	YMR027W	Q04371	470 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	RGS2	Q99188	309 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	AIP1	P46680	615 aa	Known RBP	4.12	□□□□□ -1.75
NFI1	YOR156C	VAC7	P53950	1165 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	PAL1	Q05518	499 aa	Known RBP	4.12	□□□□□ -1.75
NFI1	YOR156C	MSC3	Q05812	728 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	CUR1	Q06469	252 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	SFM1	Q12314	213 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	UBA3	Q99344	299 aa		4.12	□□□□□ -1.75
NFI1	YOR156C	CDC50	P25656	391 aa		4.11	□□□□□ -1.75
NFI1	YOR156C	GIT1	P25346	518 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	LDB16	P25587	256 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	ERG9	P29704	444 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	PMT2	P31382	759 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	RCK2	P38623	610 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	MMS21	P38632	267 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	CAB5	Q03941	241 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	YLR297W	Q05899	129 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	FRE8	Q12209	686 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	PRB1	P09232	635 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	RPL18A	P0CX49	186 aa	Known RBP	4.1	□□□□□ -1.75
NFI1	YOR156C	RPL18B	P0CX50	186 aa	Known RBP	4.1	□□□□□ -1.75
NFI1	YOR156C	YPS1	P32329	569 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	RPS0A	P32905	252 aa	Known RBP	4.1	□□□□□ -1.75
NFI1	YOR156C	OM14	P38325	134 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	TRM82	Q03774	444 aa		4.1	□□□□□ -1.75
NFI1	YOR156C	GCD2	P12754	651 aa	Predicted RBP	4.09	□□□□□ -1.75
NFI1	YOR156C	DBP3	P20447	523 aa	Known RBP	4.09	□□□□□ -1.75
NFI1	YOR156C	MIR1	P23641	311 aa	Known RBP	4.09	□□□□□ -1.75
NFI1	YOR156C	LSG1	P53145	640 aa	Known RBP	4.09	□□□□□ -1.75
NFI1	YOR156C	PRP38	Q00723	242 aa	Predicted RBP	4.09	□□□□□ -1.75
NFI1	YOR156C	YMR010W	Q03687	405 aa		4.09	□□□□□ -1.75
NFI1	YOR156C	ALE1	Q08548	619 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms