RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W FIS1P40515 155 aa3.21□□□□□ -1.9
VPS17YOR132W SNG1P46950 547 aa3.21□□□□□ -1.9
VPS17YOR132W ROG1P53118 685 aa3.21□□□□□ -1.9
VPS17YOR132W YGL108CP53139 140 aa3.21□□□□□ -1.9
VPS17YOR132W RTT102P53330 157 aa3.21□□□□□ -1.9
VPS17YOR132W DBP6P53734 629 aaKnown RBP3.21□□□□□ -1.9
VPS17YOR132W GIM3P53900 129 aa3.21□□□□□ -1.9
VPS17YOR132W SHR3Q02774 210 aa3.21□□□□□ -1.9
VPS17YOR132W STD1Q02794 444 aa3.21□□□□□ -1.9
VPS17YOR132W ERV41Q04651 352 aa3.21□□□□□ -1.9
VPS17YOR132W YDR222WQ04925 415 aa3.21□□□□□ -1.9
VPS17YOR132W FAR8Q05040 523 aa3.21□□□□□ -1.9
VPS17YOR132W ARR1Q06596 294 aa3.21□□□□□ -1.9
VPS17YOR132W RRD2Q12461 358 aa3.21□□□□□ -1.9
VPS17YOR132W JIP3O13555 125 aa3.2□□□□□ -1.9
VPS17YOR132W RAD10P06838 210 aa3.2□□□□□ -1.9
VPS17YOR132W CDC33P07260 213 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W BEM1P29366 551 aa3.2□□□□□ -1.9
VPS17YOR132W RME1P32338 300 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W ECM15P35195 104 aa3.2□□□□□ -1.9
VPS17YOR132W HEK2P38199 381 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9 RIP-Chip
VPS17YOR132W YBR032WP38223 100 aa3.2□□□□□ -1.9
VPS17YOR132W SHC1P39000 512 aa3.2□□□□□ -1.9
VPS17YOR132W DHH1P39517 506 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W IKS1P47042 667 aa3.2□□□□□ -1.9
VPS17YOR132W TMA22P47089 198 aaPredicted RBP3.2□□□□□ -1.9
VPS17YOR132W EMC2P47133 292 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W ASN2P49090 572 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W RIB4P50861 169 aaPredicted RBP3.2□□□□□ -1.9
VPS17YOR132W LIF1P53150 421 aa3.2□□□□□ -1.9
VPS17YOR132W YGR126WP53274 230 aa3.2□□□□□ -1.9
VPS17YOR132W YNL134CP53912 376 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W YNL040WP53960 456 aaPredicted RBP3.2□□□□□ -1.9
VPS17YOR132W SLG1P54867 378 aa3.2□□□□□ -1.9
VPS17YOR132W YDR541CQ03049 344 aa3.2□□□□□ -1.9
VPS17YOR132W ECM7Q06200 448 aa3.2□□□□□ -1.9
VPS17YOR132W YLR173WQ06247 608 aa3.2□□□□□ -1.9
VPS17YOR132W CMS1Q07897 291 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W TAF10Q12030 206 aa3.2□□□□□ -1.9
VPS17YOR132W YOL107WQ12239 342 aa3.2□□□□□ -1.9
VPS17YOR132W SEY1Q99287 776 aa3.2□□□□□ -1.9
VPS17YOR132W GPH1P06738 902 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W RIP1P08067 215 aa3.2□□□□□ -1.9
VPS17YOR132W MRS3P10566 314 aa3.2□□□□□ -1.9
VPS17YOR132W TCP1P12612 559 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W RSR1P13856 272 aa3.2□□□□□ -1.9
VPS17YOR132W HEM15P16622 393 aa3.2□□□□□ -1.9
VPS17YOR132W MEK1P24719 497 aaPredicted RBP3.2□□□□□ -1.9
VPS17YOR132W DAL2P25335 343 aa3.2□□□□□ -1.9
VPS17YOR132W TPS2P31688 896 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W MUD1P32605 298 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W SHP1P34223 423 aa3.2□□□□□ -1.9
VPS17YOR132W YBP1P38315 674 aa3.2□□□□□ -1.9
VPS17YOR132W VHC1P38329 1120 aa3.2□□□□□ -1.9
VPS17YOR132W GPI16P38875 610 aa3.2□□□□□ -1.9
VPS17YOR132W MDM31P38880 579 aa3.2□□□□□ -1.9
VPS17YOR132W PHO86P46956 311 aa3.2□□□□□ -1.9
VPS17YOR132W YGL114WP53134 725 aa3.2□□□□□ -1.9
VPS17YOR132W TIM21P53220 239 aa3.2□□□□□ -1.9
VPS17YOR132W TRM44Q02648 567 aaKnown RBP3.2□□□□□ -1.9
VPS17YOR132W RPM2Q02773 1202 aa3.2□□□□□ -1.9
VPS17YOR132W CAB5Q03941 241 aa3.2□□□□□ -1.9
VPS17YOR132W MDM30Q05930 598 aa3.2□□□□□ -1.9
VPS17YOR132W BCP1Q06338 283 aa3.2□□□□□ -1.9
VPS17YOR132W IPK1Q06667 281 aa3.2□□□□□ -1.9
VPS17YOR132W RKM1Q08961 583 aaPredicted RBP3.2□□□□□ -1.9
VPS17YOR132W GIS3Q12418 502 aa3.2□□□□□ -1.9
VPS17YOR132W COR1P07256 457 aa3.19□□□□□ -1.9
VPS17YOR132W SUA5P32579 426 aa3.19□□□□□ -1.9
VPS17YOR132W CSG2P35206 410 aa3.19□□□□□ -1.9
VPS17YOR132W MRX3P38172 270 aa3.19□□□□□ -1.9
VPS17YOR132W MBB1P39534 108 aa3.19□□□□□ -1.9
VPS17YOR132W YHC3P47040 408 aa3.19□□□□□ -1.9
VPS17YOR132W CPR7P47103 393 aa3.19□□□□□ -1.9
VPS17YOR132W BIO3P50277 480 aa3.19□□□□□ -1.9
VPS17YOR132W RPL22BP56628 122 aaKnown RBP3.19□□□□□ -1.9
VPS17YOR132W SPC24Q04477 213 aa3.19□□□□□ -1.9
VPS17YOR132W SCW10Q04951 389 aa3.19□□□□□ -1.9
VPS17YOR132W RRG8Q06109 277 aa3.19□□□□□ -1.9
VPS17YOR132W PPT2Q12036 173 aa3.19□□□□□ -1.9
VPS17YOR132W YBR298C-AQ8TGK4 73 aa3.19□□□□□ -1.9
VPS17YOR132W SRN2Q99176 213 aa3.19□□□□□ -1.9
VPS17YOR132W HPR1P17629 752 aaKnown RBP3.18□□□□□ -1.9
VPS17YOR132W SGV1P23293 657 aaKnown RBP3.18□□□□□ -1.9
VPS17YOR132W SIN4P32259 974 aa3.18□□□□□ -1.9
VPS17YOR132W MGM101P32787 269 aaKnown RBP3.18□□□□□ -1.9
VPS17YOR132W CBF5P33322 483 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS17YOR132W STN1P38960 494 aa3.18□□□□□ -1.9
VPS17YOR132W YMR134WP40207 237 aa3.18□□□□□ -1.9
VPS17YOR132W MSS2P40990 351 aa3.18□□□□□ -1.9
VPS17YOR132W HSH155P49955 971 aaKnown RBP3.18□□□□□ -1.9
VPS17YOR132W URC2Q04411 772 aa3.18□□□□□ -1.9
VPS17YOR132W PKH2Q12236 1081 aaKnown RBP3.18□□□□□ -1.9
VPS17YOR132W BI3Q9ZZW7 517 aa3.18□□□□□ -1.9
VPS17YOR132W RHO2P06781 192 aa3.17□□□□□ -1.9
VPS17YOR132W CMD1P06787 147 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W NFT1P0CE68 1218 aa3.17□□□□□ -1.9
VPS17YOR132W MTF1P14908 341 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W MSS116P15424 664 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W RHB1P25378 209 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms