RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C CHK1P38147 527 aa3.88□□□□□ -1.79
VPS21YOR089C YBP1P38315 674 aa3.88□□□□□ -1.79
VPS21YOR089C MTC6P38849 526 aa3.88□□□□□ -1.79
VPS21YOR089C MDM31P38880 579 aa3.88□□□□□ -1.79
VPS21YOR089C YND1P40009 630 aa3.88□□□□□ -1.79
VPS21YOR089C LCP5P40079 357 aaPredicted RBP3.88□□□□□ -1.79
VPS21YOR089C TRM112P53738 135 aaPredicted RBP3.88□□□□□ -1.79
VPS21YOR089C RTT103Q05543 409 aa3.88□□□□□ -1.79
VPS21YOR089C AYT1Q12226 474 aa3.88□□□□□ -1.79
VPS21YOR089C UTP10P42945 1769 aaKnown RBP3.87□□□□□ -1.79
VPS21YOR089C RPL15AP05748 204 aaKnown RBP3.87□□□□□ -1.79
VPS21YOR089C CDC23P16522 626 aa3.87□□□□□ -1.79
VPS21YOR089C DBR1P24309 405 aaKnown RBP3.87□□□□□ -1.79
VPS21YOR089C MUD1P32605 298 aaKnown RBP3.87□□□□□ -1.79
VPS21YOR089C RIB7P33312 244 aa3.87□□□□□ -1.79
VPS21YOR089C MCR1P36060 302 aaKnown RBP3.87□□□□□ -1.79
VPS21YOR089C MIX23P38162 196 aa3.87□□□□□ -1.79
VPS21YOR089C COX14P39103 70 aa3.87□□□□□ -1.79
VPS21YOR089C RPH1P39956 796 aa3.87□□□□□ -1.79
VPS21YOR089C YFL067WP43537 175 aa3.87□□□□□ -1.79
VPS21YOR089C VOA1P53262 265 aa3.87□□□□□ -1.79
VPS21YOR089C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
VPS21YOR089C ABZ2Q03266 374 aa3.87□□□□□ -1.79
VPS21YOR089C YLR413WQ06689 675 aa3.87□□□□□ -1.79
VPS21YOR089C LOT6Q07923 191 aa3.87□□□□□ -1.79
VPS21YOR089C DAP1Q12091 152 aa3.87□□□□□ -1.79
VPS21YOR089C YLR108CQ12259 485 aa3.87□□□□□ -1.79
VPS21YOR089C RGT2Q12300 763 aa3.87□□□□□ -1.79
VPS21YOR089C YDR262WQ12331 272 aa3.87□□□□□ -1.79
VPS21YOR089C MRS3P10566 314 aa3.86□□□□□ -1.79
VPS21YOR089C CPR1P14832 162 aaKnown RBP3.86□□□□□ -1.79
VPS21YOR089C ITR1P30605 584 aa3.86□□□□□ -1.79
VPS21YOR089C MRP4P32902 394 aa3.86□□□□□ -1.79
VPS21YOR089C RTC2P38279 296 aa3.86□□□□□ -1.79
VPS21YOR089C DHH1P39517 506 aaKnown RBP3.86□□□□□ -1.79
VPS21YOR089C LOC1P43586 204 aaPredicted RBP3.86□□□□□ -1.79
VPS21YOR089C LOH1P47055 219 aa3.86□□□□□ -1.79
VPS21YOR089C AIM33Q04516 312 aa3.86□□□□□ -1.79
VPS21YOR089C SHS1Q07657 551 aa3.86□□□□□ -1.79
VPS21YOR089C YOR012WQ12351 137 aa3.86□□□□□ -1.79
VPS21YOR089C HTZ1Q12692 134 aaKnown RBP3.86□□□□□ -1.79
VPS21YOR089C MEX67Q99257 599 aaKnown RBP3.86□□□□□ -1.79
VPS21YOR089C CAP2P13517 287 aa3.85□□□□□ -1.79
VPS21YOR089C EXG1P23776 448 aaKnown RBP3.85□□□□□ -1.79
VPS21YOR089C PRO3P32263 286 aaKnown RBP3.85□□□□□ -1.79
VPS21YOR089C RAD5P32849 1169 aaPredicted RBP3.85□□□□□ -1.79
VPS21YOR089C VAM7P32912 316 aa3.85□□□□□ -1.79
VPS21YOR089C YBR139WP38109 508 aa3.85□□□□□ -1.79
VPS21YOR089C SWC5P38326 303 aa3.85□□□□□ -1.79
VPS21YOR089C YHR131CP38835 850 aa3.85□□□□□ -1.79
VPS21YOR089C AIM20P40451 204 aa3.85□□□□□ -1.79
VPS21YOR089C RPR2P40571 144 aa3.85□□□□□ -1.79
VPS21YOR089C OST1P41543 476 aaKnown RBP3.85□□□□□ -1.79
VPS21YOR089C LSC1P53598 329 aaKnown RBP3.85□□□□□ -1.79
VPS21YOR089C CRZ1P53968 678 aa3.85□□□□□ -1.79
VPS21YOR089C CAB5Q03941 241 aa3.85□□□□□ -1.79
VPS21YOR089C PRM6Q04705 352 aa3.85□□□□□ -1.79
VPS21YOR089C MRPL35Q06678 367 aa3.85□□□□□ -1.79
VPS21YOR089C APC5Q08683 685 aa3.85□□□□□ -1.79
VPS21YOR089C AIM45Q12480 344 aaKnown RBP3.85□□□□□ -1.79
VPS21YOR089C YOR338WQ99326 363 aa3.85□□□□□ -1.79
VPS21YOR089C SUP35P05453 685 aaKnown RBP3.84□□□□□ -1.79
VPS21YOR089C ARF2P19146 181 aaKnown RBP3.84□□□□□ -1.79
VPS21YOR089C CKI1P20485 582 aa3.84□□□□□ -1.79
VPS21YOR089C SEC1P30619 724 aaKnown RBP3.84□□□□□ -1.79
VPS21YOR089C PPQ1P32945 549 aa3.84□□□□□ -1.79
VPS21YOR089C GEP4P38812 185 aa3.84□□□□□ -1.79
VPS21YOR089C PEX18P38855 283 aa3.84□□□□□ -1.79
VPS21YOR089C YHR182WP38870 785 aa3.84□□□□□ -1.79
VPS21YOR089C SIM1P40472 476 aa3.84□□□□□ -1.79
VPS21YOR089C YJL213WP40896 331 aa3.84□□□□□ -1.79
VPS21YOR089C RRN9P53437 365 aa3.84□□□□□ -1.79
VPS21YOR089C GOR1P53839 350 aa3.84□□□□□ -1.79
VPS21YOR089C YMR010WQ03687 405 aa3.84□□□□□ -1.79
VPS21YOR089C SMP3Q04174 516 aa3.84□□□□□ -1.79
VPS21YOR089C RRN11Q04712 507 aa3.84□□□□□ -1.79
VPS21YOR089C CUR1Q06469 252 aa3.84□□□□□ -1.79
VPS21YOR089C AHC1Q12433 566 aa3.84□□□□□ -1.79
VPS21YOR089C RRP36Q12481 300 aaPredicted RBP3.84□□□□□ -1.79
VPS21YOR089C DCP1Q12517 231 aaPredicted RBP3.84□□□□□ -1.79
VPS21YOR089C SPO24Q3E752 67 aa3.84□□□□□ -1.79
VPS21YOR089C SAC3P46674 1301 aa3.84□□□□□ -1.79
VPS21YOR089C HEM15P16622 393 aa3.83□□□□□ -1.8
VPS21YOR089C VMA5P31412 392 aaKnown RBP3.83□□□□□ -1.8
VPS21YOR089C TOA2P32774 122 aa3.83□□□□□ -1.8
VPS21YOR089C PAD1P33751 242 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
VPS21YOR089C YKL097CP34245 136 aa3.83□□□□□ -1.8
VPS21YOR089C RBG1P39729 369 aa3.83□□□□□ -1.8
VPS21YOR089C JLP2P40206 208 aa3.83□□□□□ -1.8
VPS21YOR089C MAM33P40513 266 aa3.83□□□□□ -1.8
VPS21YOR089C YIL029CP40538 142 aa3.83□□□□□ -1.8
VPS21YOR089C YDL186WP48568 277 aa3.83□□□□□ -1.8
VPS21YOR089C RPN14P53196 417 aa3.83□□□□□ -1.8
VPS21YOR089C APC4Q04601 652 aa3.83□□□□□ -1.8
VPS21YOR089C RRG8Q06109 277 aa3.83□□□□□ -1.8
VPS21YOR089C MDM36Q06820 579 aa3.83□□□□□ -1.8
VPS21YOR089C PPT2Q12036 173 aa3.83□□□□□ -1.8
VPS21YOR089C THP3Q12049 470 aaKnown RBP3.83□□□□□ -1.8
VPS21YOR089C SSK22P25390 1331 aaPredicted RBP3.83□□□□□ -1.8
VPS21YOR089C DUR1,2P32528 1835 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms