RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C YER145C-AA0A023PYF4 145 aa2.29□□□□□ -2.04
SGS1YMR190C COS2P0CX12 379 aa2.29□□□□□ -2.04
SGS1YMR190C COS3P0CX13 379 aa2.29□□□□□ -2.04
SGS1YMR190C SNF4P12904 322 aa2.29□□□□□ -2.04
SGS1YMR190C POL4P25615 582 aa2.29□□□□□ -2.04
SGS1YMR190C FEN2P25621 512 aaKnown RBP2.29□□□□□ -2.04
SGS1YMR190C CDC5P32562 705 aa2.29□□□□□ -2.04
SGS1YMR190C MRPL6P32904 214 aa2.29□□□□□ -2.04
SGS1YMR190C YHR210CP38893 341 aa2.29□□□□□ -2.04
SGS1YMR190C BOL3P39724 118 aa2.29□□□□□ -2.04
SGS1YMR190C YEL057CP39983 233 aa2.29□□□□□ -2.04
SGS1YMR190C MPM1P40364 252 aa2.29□□□□□ -2.04
SGS1YMR190C STB1P42845 420 aa2.29□□□□□ -2.04
SGS1YMR190C COS4P43542 379 aa2.29□□□□□ -2.04
SGS1YMR190C NBP35P52920 328 aa2.29□□□□□ -2.04
SGS1YMR190C EFM5P53200 248 aaKnown RBP2.29□□□□□ -2.04
SGS1YMR190C COS1P53822 381 aa2.29□□□□□ -2.04
SGS1YMR190C REG1Q00816 1014 aa2.29□□□□□ -2.04
SGS1YMR190C YPL067CQ02754 198 aa2.29□□□□□ -2.04
SGS1YMR190C SMP3Q04174 516 aa2.29□□□□□ -2.04
SGS1YMR190C RAD33Q04231 177 aa2.29□□□□□ -2.04
SGS1YMR190C KRE28Q04431 385 aa2.29□□□□□ -2.04
SGS1YMR190C YMR310CQ04867 317 aaPredicted RBP2.29□□□□□ -2.04
SGS1YMR190C YPR097WQ06839 1073 aa2.29□□□□□ -2.04
SGS1YMR190C YBL029C-AQ3E756 94 aa2.29□□□□□ -2.04
SGS1YMR190C NAM2P11325 894 aa2.29□□□□□ -2.04
SGS1YMR190C TAL1P15019 335 aaKnown RBP2.29□□□□□ -2.04
SGS1YMR190C PTP2P29461 750 aa2.29□□□□□ -2.04
SGS1YMR190C CBF5P33322 483 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SGS1YMR190C SLM4P38247 162 aa2.29□□□□□ -2.04
SGS1YMR190C REE1P40893 198 aa2.29□□□□□ -2.04
SGS1YMR190C DCP2P53550 970 aaKnown RBP2.29□□□□□ -2.04
SGS1YMR190C SPR28Q04921 423 aa2.29□□□□□ -2.04
SGS1YMR190C YDL180WQ12301 547 aa2.29□□□□□ -2.04
SGS1YMR190C YCL012CQ8J0M4 134 aa2.29□□□□□ -2.04
SGS1YMR190C CDC21P06785 304 aa2.28□□□□□ -2.04
SGS1YMR190C PEX6P33760 1030 aa2.28□□□□□ -2.04
SGS1YMR190C DHR2P36009 735 aaPredicted RBP2.28□□□□□ -2.04
SGS1YMR190C TAT1P38085 619 aa2.28□□□□□ -2.04
SGS1YMR190C ECM8P38246 354 aa2.28□□□□□ -2.04
SGS1YMR190C MTW1P39731 289 aa2.28□□□□□ -2.04
SGS1YMR190C BUD8P41698 603 aa2.28□□□□□ -2.04
SGS1YMR190C GPI8P49018 411 aa2.28□□□□□ -2.04
SGS1YMR190C KXD1P53158 218 aa2.28□□□□□ -2.04
SGS1YMR190C GPI1P53306 609 aa2.28□□□□□ -2.04
SGS1YMR190C SMM1P53720 384 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C YPL108WQ02872 168 aaPredicted RBP2.28□□□□□ -2.04
SGS1YMR190C GPI11Q06636 219 aa2.28□□□□□ -2.04
SGS1YMR190C NMD4Q12129 218 aa2.28□□□□□ -2.04
SGS1YMR190C YPL245WQ12179 454 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C YOL159C-AQ3E769 90 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-LR1P0C2J4 438 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-FP0CX61 438 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-GR2P0CX62 438 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-CP25383 438 aa2.28□□□□□ -2.04
SGS1YMR190C MXR2P25566 168 aa2.28□□□□□ -2.04
SGS1YMR190C SYP1P25623 870 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C MEI5P32489 222 aa2.28□□□□□ -2.04
SGS1YMR190C BAP2P38084 609 aa2.28□□□□□ -2.04
SGS1YMR190C SOP4P39543 234 aaPredicted RBP2.28□□□□□ -2.04
SGS1YMR190C AIM22P47051 409 aa2.28□□□□□ -2.04
SGS1YMR190C YJL043WP47053 257 aa2.28□□□□□ -2.04
SGS1YMR190C STE24P47154 453 aa2.28□□□□□ -2.04
SGS1YMR190C YPT32P51996 222 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C EMC4P53073 190 aa2.28□□□□□ -2.04
SGS1YMR190C SYF2P53277 215 aaPredicted RBP2.28□□□□□ -2.04
SGS1YMR190C YNR068CP53754 272 aa2.28□□□□□ -2.04
SGS1YMR190C CUZ1P53899 274 aa2.28□□□□□ -2.04
SGS1YMR190C ARG5,6Q01217 863 aa2.28□□□□□ -2.04
SGS1YMR190C YMR099CQ03161 297 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C TY2A-DR2Q03483 438 aa2.28□□□□□ -2.04
SGS1YMR190C RPC11Q04307 110 aaPredicted RBP2.28□□□□□ -2.04
SGS1YMR190C YLL007CQ07799 665 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-BQ12260 438 aa2.28□□□□□ -2.04
SGS1YMR190C HER1Q12276 1246 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-OR2Q12293 438 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-DR1Q12392 438 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-OR1Q12439 438 aa2.28□□□□□ -2.04
SGS1YMR190C TY2A-DR3Q99303 438 aa2.28□□□□□ -2.04
SGS1YMR190C RPS23AP0CX29 145 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C RPS23BP0CX30 145 aa2.28□□□□□ -2.04
SGS1YMR190C VPS33P20795 691 aa2.28□□□□□ -2.04
SGS1YMR190C CMK2P22517 447 aa2.28□□□□□ -2.04
SGS1YMR190C CTR86P25355 563 aa2.28□□□□□ -2.04
SGS1YMR190C GDH2P33327 1092 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C FMP46P36141 133 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C YKR078WP36158 585 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C EFM1P38732 585 aa2.28□□□□□ -2.04
SGS1YMR190C MPH1P40562 993 aa2.28□□□□□ -2.04
SGS1YMR190C YJR012CP47087 207 aa2.28□□□□□ -2.04
SGS1YMR190C ROG1P53118 685 aa2.28□□□□□ -2.04
SGS1YMR190C ARR2Q06597 130 aa2.28□□□□□ -2.04
SGS1YMR190C THP3Q12049 470 aaKnown RBP2.28□□□□□ -2.04
SGS1YMR190C RUP1Q12242 671 aa2.28□□□□□ -2.04
SGS1YMR190C RIB3Q99258 208 aa2.28□□□□□ -2.04
SGS1YMR190C RAD52P06778 471 aaKnown RBP2.28□□□□□ -2.05
SGS1YMR190C UNG1P12887 359 aa2.28□□□□□ -2.05
SGS1YMR190C FAR1P21268 830 aa2.28□□□□□ -2.05
SGS1YMR190C SPO23P33757 523 aa2.28□□□□□ -2.05
SGS1YMR190C TIF3P34167 436 aaKnown RBP2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 126 ms